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WormBase Tree Display for Gene: WBGene00039617

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Name Class

WBGene00039617SMapS_parentSequencecb25.fpc4206a
IdentityVersion1
NameSequence_nameCBG20679
Molecular_nameCBG20679
CBG20679.1
CBP04881
Other_nameCBG_20679Accession_evidenceNDBHE600991
Public_nameCBG20679
DB_infoDatabaseNDBlocus_tagCBG_20679
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00031404
WBVar00031409
RNASeq_FPKMWBls:0000002122.194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
139.223From_analysisRNASeq.briggsae.WBls:0000002.control_mean
143.292From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
152.183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
136.152From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
138.455From_analysisRNASeq.briggsae.WBls:0000002.control_mean
139.722From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003101.567From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
122.736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
80.3987From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
87.7568From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
96.9638From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004100.108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
103.912From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
107.717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
104.495From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
106.795From_analysisRNASeq.briggsae.WBls:0000004.control_mean
122.26From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
99.3949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002712.621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
167.021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
36.344From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
71.9953From_analysisRNASeq.briggsae.WBls:0000027.control_mean
159.02From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
93.7515From_analysisRNASeq.briggsae.WBls:0000027.control_mean
97.682From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:0000035162.884From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038125.263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
125.819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
159.366From_analysisRNASeq.briggsae.WBls:0000038.control_median
165.362From_analysisRNASeq.briggsae.WBls:0000038.control_mean
192.913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
217.453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041107.601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
111.991From_analysisRNASeq.briggsae.WBls:0000041.control_median
116.38From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
117.907From_analysisRNASeq.briggsae.WBls:0000041.control_mean
155.258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
92.3895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
131.321From_analysisRNASeq.briggsae.WBls:0000041.control_mean
133.212From_analysisRNASeq.briggsae.WBls:0000041.control_median
150.045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
166.251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063108.383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
112.694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
113.006From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
120.369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
132.394From_analysisRNASeq.briggsae.WBls:0000063.control_mean
207.52From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
116.688From_analysisRNASeq.briggsae.WBls:0000063.control_median
135.68From_analysisRNASeq.briggsae.WBls:0000063.control_mean
152.11From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101122.736From_analysisRNASeq.briggsae.total_over_all_stages.control_median
127.098From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
123.999From_analysisRNASeq.briggsae.total_over_all_stages.control_median
127.982From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00143082
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to be located in mitochondrion. Is an ortholog of C. elegans Y51H1A.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20679
Corresponding_CDS_historyCBG20679:bp194
Corresponding_transcriptCBG20679.1
Other_sequence (53)
Experimental_infoExpr_patternExpr1069167
Microarray_resultsGPL8303_CB6_WBGene00039617_A
GPL8303_CB6_WBGene00039617_B
GPL14143_CBG20679_82-141_0.415_108_B
GPL14143_CBG20679_186-245_0.878_8_A
GPL14143_CBG20679_498-557_0.827_35_C
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene