Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00039266

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00039266SMapS_parentSequencecb25.fpc4168
IdentityVersion2
NameCGC_nameCbr-rab-39From_analysisInferred_from_orthology
Sequence_nameCBG20230
Molecular_nameCBG20230
CBG20230.1
CBP04746
Other_nameCBG_20230Accession_evidenceNDBHE601386
Public_nameCbr-rab-39
DB_infoDatabaseNDBlocus_tagCBG_20230
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-rab-39
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrab
RNASeq_FPKMWBls:000000211.6048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.7681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.97202From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.11497From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.79719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.8846From_analysisRNASeq.briggsae.WBls:0000002.control_median
7.78553From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000310.851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
11.1405From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
11.43From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
11.6277From_analysisRNASeq.briggsae.WBls:0000003.control_mean
12.6021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000044.58947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.40661From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
6.22376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
7.17732From_analysisRNASeq.briggsae.WBls:0000004.control_mean
7.22671From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
8.91634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
8.93032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.203824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.967398From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.05726From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.00055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
10.189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.98397From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.09019From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000356.26795From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.0003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.65267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
5.99007From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.09723From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.36797From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.74586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004110.9566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
11.0387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.3068From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.7966From_analysisRNASeq.briggsae.WBls:0000041.control_mean
13.5749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
15.6162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
14.5955From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.8723From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.7285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
21.3189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000632.86218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.97515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.37089From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.68093From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.71329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.62292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.69711From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.71316From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.42451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001016.22376From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.24574From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.09937From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.13842From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142758
00142759
Ortholog (31)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans rab-39. In C. elegans, rab-39 is involved in positive regulation of response to oxidative stress.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20230
Corresponding_CDS_historyCBG20230:bp194
CBG20230:bp255
Corresponding_transcriptCBG20230.1
Other_sequence (25)
Experimental_infoExpr_patternExpr1069587
Microarray_resultsGPL8303_CB6_WBGene00039266_A
GPL8303_CB6_WBGene00039266_B
GPL14143_CBG20230_180-239_0.860_7_B
GPL14143_CBG20230_375-434_0.860_6_C
GPL14143_CBG20230_463-522_0.861_5_A
MethodGene