Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00038844

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00038844SMapS_parentSequencecb25.fpc4132b
IdentityVersion2
NameCGC_nameCbr-mrps-17From_analysisInferred_from_orthology
Sequence_nameCBG19669
Molecular_nameCBG19669
CBG19669.1
CBP19683
Other_nameCBG_19669Accession_evidenceNDBHE600934
Public_nameCbr-mrps-17
DB_infoDatabaseNDBlocus_tagCBG_19669
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
210 Jun 2011 16:53:57WBPerson2970Name_changeCGC_nameCbr-mrps-17
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmrps
RNASeq_FPKMWBls:000000216.1863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
19.6544From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
21.7357From_analysisRNASeq.briggsae.WBls:0000002.control_mean
29.3663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
23.4175From_analysisRNASeq.briggsae.WBls:0000002.control_mean
24.0588From_analysisRNASeq.briggsae.WBls:0000002.control_median
28.4632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000318.9005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
23.4292From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
27.9579From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
18.13From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
21.6628From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000427.3818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
27.386From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
27.3901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
28.015From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
32.322From_analysisRNASeq.briggsae.WBls:0000004.control_mean
32.4094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
46.4138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002715.6981From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.98205From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
39.4467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.66552From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
17.6305From_analysisRNASeq.briggsae.WBls:0000027.control_median
19.1724From_analysisRNASeq.briggsae.WBls:0000027.control_mean
29.5954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003521.7637From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
18.0981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
21.8209From_analysisRNASeq.briggsae.WBls:0000038.control_median
25.5438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
25.6047From_analysisRNASeq.briggsae.WBls:0000038.control_mean
46.3019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004126.224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
27.8304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
32.4745From_analysisRNASeq.briggsae.WBls:0000041.control_median
33.5412From_analysisRNASeq.briggsae.WBls:0000041.control_mean
37.1187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
42.9917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
24.8214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
32.7136From_analysisRNASeq.briggsae.WBls:0000041.control_mean
37.2951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006320.5142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
23.0206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
27.5812From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
28.102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
34.968From_analysisRNASeq.briggsae.WBls:0000063.control_mean
75.622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
26.1512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
26.8662From_analysisRNASeq.briggsae.WBls:0000063.control_median
33.4985From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010126.8394From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
27.3818From_analysisRNASeq.briggsae.total_over_all_stages.control_median
27.4856From_analysisRNASeq.briggsae.total_over_all_stages.control_median
27.622From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142313
00142314
Contained_in_operonCBOPA1012
Ortholog (27)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Is an ortholog of C. elegans mrps-17.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19669
Corresponding_CDS_historyCBG19669:bp194
Corresponding_transcriptCBG19669.1
Other_sequence (22)
Experimental_infoExpr_patternExpr1062396
Microarray_resultsGPL8303_CB6_WBGene00038844_A
GPL8303_CB6_WBGene00038844_B
GPL14143_CBG19669_28-87_0.914_19_C
GPL14143_CBG19669_291-350_0.796_53_B
GPL14143_CBG19669_376-435_0.947_7_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene