Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00038813

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00038813SMapS_parentSequencecb25.fpc4131
IdentityVersion2
NameCGC_nameCbr-lin-8From_analysisInferred_from_orthology
Sequence_nameCBG19631
Molecular_nameCBG19631
CBG19631.1
CBP11226
Other_nameCBG_19631Accession_evidenceNDBHE601321
Public_nameCbr-lin-8
DB_infoDatabaseNDBlocus_tagCBG_19631
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-lin-8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
RNASeq_FPKMWBls:000000210.6703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.82252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.98799From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
7.16027From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.28318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.63558From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.441From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000316.6245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
23.712From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
30.7996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
24.5241From_analysisRNASeq.briggsae.WBls:0000003.control_mean
26.1483From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000442.5895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
43.3968From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
44.2041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
41.5904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
44.0489From_analysisRNASeq.briggsae.WBls:0000004.control_mean
44.7193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
47.1412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.772487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
16.0747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.71904From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.18874From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.4978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.10842From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.26601From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000358.15527From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000382.51396From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
5.67985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.78423From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.79374From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.90762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.0355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000415.8532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.27621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.31499From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.32549From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.35377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.81879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.58628From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.75288From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.00412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
8.2112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000633.41832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.76066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.89534From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.36408From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.65598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.09011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.27566From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.73864From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.61143From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010110.3079From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.35377From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.0299From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.99606From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (28)
ParalogWBGene00038797Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00025680Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042541Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00087185Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00088120Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Protein LIN-8 and Ras-mediated vulval-induction antagonist. Is an ortholog of C. elegans lin-8. In C. elegans, lin-8 is involved in negative regulation of vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19631
Corresponding_CDS_historyCBG19631:bp194
Corresponding_transcriptCBG19631.1
Other_sequenceCSC01692_1
FD516949.1
FG620584.1
FG620588.1
FG620586.1
FG620587.1
FG620589.1
Experimental_infoExpr_patternExpr1069535
Microarray_resultsGPL8303_CB6_WBGene00038813_A
GPL8303_CB6_WBGene00038813_B
GPL14143_CBG19631_944-1003_0.713_122_A
MethodGene