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WormBase Tree Display for Gene: WBGene00038649

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Name Class

WBGene00038649SMapS_parentSequencecb25.fpc4126
IdentityVersion1
NameSequence_nameCBG19425
Molecular_nameCBG19425
CBG19425.1
CBP04493
Other_nameCBG_19425Accession_evidenceNDBHE601047
Public_nameCBG19425
DB_infoDatabaseNDBlocus_tagCBG_19425
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002117.762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
50.5348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
78.7384From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
82.3451From_analysisRNASeq.briggsae.WBls:0000002.control_mean
66.9046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
72.8215From_analysisRNASeq.briggsae.WBls:0000002.control_median
78.4849From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003100.082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
126.868From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
153.655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
121.881From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
125.206From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000471.0236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
78.1955From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
85.3675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
67.507From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
73.6804From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
77.2743From_analysisRNASeq.briggsae.WBls:0000004.control_mean
88.7932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002715.9802From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
26.3929From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.81762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
59.3808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
37.1029From_analysisRNASeq.briggsae.WBls:0000027.control_mean
37.6805From_analysisRNASeq.briggsae.WBls:0000027.control_median
69.2329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003559.7444From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038102.041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
18.7307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
65.4995From_analysisRNASeq.briggsae.WBls:0000038.control_mean
68.3214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
70.6131From_analysisRNASeq.briggsae.WBls:0000038.control_median
72.9048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041102.408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
103.19From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
104.841From_analysisRNASeq.briggsae.WBls:0000041.control_median
106.493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
108.853From_analysisRNASeq.briggsae.WBls:0000041.control_mean
123.32From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
114.907From_analysisRNASeq.briggsae.WBls:0000041.control_median
131.328From_analysisRNASeq.briggsae.WBls:0000041.control_mean
144.675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
207.881From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
56.8892From_analysisRNASeq.briggsae.WBls:0000063.control_mean
62.9718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
64.6819From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
70.4229From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
86.3695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
59.4616From_analysisRNASeq.briggsae.WBls:0000063.control_mean
67.5524From_analysisRNASeq.briggsae.WBls:0000063.control_median
72.3233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010171.0236From_analysisRNASeq.briggsae.total_over_all_stages.control_median
72.8557From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
72.6141From_analysisRNASeq.briggsae.total_over_all_stages.control_median
79.6235From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (30)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Metal-dependent protein hydrolase and Uncharacterised protein family (UPF0160). Is an ortholog of C. elegans C27H6.8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19425
Corresponding_CDS_historyCBG19425:bp194
Corresponding_transcriptCBG19425.1
Other_sequence (71)
Experimental_infoExpr_patternExpr1063297
Microarray_resultsGPL8303_CB6_WBGene00038649_A
GPL8303_CB6_WBGene00038649_B
GPL14143_CBG19425_674-733_0.876_24_C
GPL14143_CBG19425_781-840_0.947_1_A
GPL14143_CBG19425_962-1021_0.932_5_B
MethodGene