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WormBase Tree Display for Gene: WBGene00038639

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Name Class

WBGene00038639SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-ttr-46From_analysisInferred_from_orthology
Sequence_nameCBG19413
Molecular_nameCBG19413
CBG19413.1
CBP36497
Other_nameCBG_19413Accession_evidenceNDBHE601047
Public_nameCbr-ttr-46
DB_infoDatabaseNDBlocus_tagCBG_19413
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-ttr-46
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttr
RNASeq_FPKMWBls:0000002125.494From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
199.811From_analysisRNASeq.briggsae.WBls:0000002.control_mean
383.218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
90.7209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
108.107From_analysisRNASeq.briggsae.WBls:0000002.control_median
167.859From_analysisRNASeq.briggsae.WBls:0000002.control_mean
72.0017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.59603From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.19206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
3.38783From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.97142From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.0211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
8.46571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
9.24341From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
10.2472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
10.2884From_analysisRNASeq.briggsae.WBls:0000004.control_mean
13.0537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
9.65438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:0000027100.99From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
20.9942From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
42.1822From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.56243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
126.752From_analysisRNASeq.briggsae.WBls:0000027.control_mean
380.46From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
60.9921From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:0000035207.615From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038174.375From_analysisRNASeq.briggsae.WBls:0000038.control_mean
177.45From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
179.111From_analysisRNASeq.briggsae.WBls:0000038.control_median
180.771From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
270.148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
69.1307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041189.013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
57.968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
67.9887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
69.0377From_analysisRNASeq.briggsae.WBls:0000041.control_median
70.0866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
96.2641From_analysisRNASeq.briggsae.WBls:0000041.control_mean
129.55From_analysisRNASeq.briggsae.WBls:0000041.control_median
168.866From_analysisRNASeq.briggsae.WBls:0000041.control_mean
238.633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
389.507From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063105.558From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
108.712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
151.083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
92.8007From_analysisRNASeq.briggsae.WBls:0000063.control_mean
98.6505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
107.135From_analysisRNASeq.briggsae.WBls:0000063.control_median
116.546From_analysisRNASeq.briggsae.WBls:0000063.control_mean
235.273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101100.99From_analysisRNASeq.briggsae.total_over_all_stages.control_median
117.993From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
125.674From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
99.8203From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00142140
Ortholog (31)
Paralog (49)
Structured_descriptionAutomated_descriptionPredicted to be located in cell surface. Is an ortholog of C. elegans ttr-46.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19413
Corresponding_CDS_historyCBG19413:bp194
Corresponding_transcriptCBG19413.1
Other_sequence (95)
Experimental_infoExpr_patternExpr1069946
Microarray_resultsGPL8303_CB6_WBGene00038639_A
GPL8303_CB6_WBGene00038639_B
GPL14143_CBG19413_180-239_0.944_3_A
GPL14143_CBG19413_314-373_0.868_19_C
GPL14143_CBG19413_377-436_0.824_36_B
MethodGene