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WormBase Tree Display for Gene: WBGene00038580

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Name Class

WBGene00038580SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-nlp-73From_analysisInferred_from_orthology
Sequence_nameCBG19338
Molecular_nameCBG19338
CBG19338.1
CBP46336
Other_nameCBG_19338Accession_evidenceNDBHE601047
Public_nameCbr-nlp-73
DB_infoDatabaseNDBlocus_tagCBG_19338
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
222 Dec 2017 13:03:49WBPerson1983Name_changeCGC_nameCbr-nlp-73
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnlp
RNASeq_FPKMWBls:000000211.5543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
16.7319From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
22.5219From_analysisRNASeq.briggsae.WBls:0000002.control_mean
39.2794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.7355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
16.2337From_analysisRNASeq.briggsae.WBls:0000002.control_median
20.8253From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.7432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.58668From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.43015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.16846From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.44727From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000041.91465From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.8293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
3.95096From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
3.95648From_analysisRNASeq.briggsae.WBls:0000004.control_mean
5.50717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
6.49497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002710.6684From_analysisRNASeq.briggsae.WBls:0000027.control_mean
23.6932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.81716From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.49488From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
13.6409From_analysisRNASeq.briggsae.WBls:0000027.control_median
13.698From_analysisRNASeq.briggsae.WBls:0000027.control_mean
22.7869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003522.3771From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.1756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
11.6018From_analysisRNASeq.briggsae.WBls:0000038.control_mean
11.9249From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.6743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
17.1699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.38739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004121.4485From_analysisRNASeq.briggsae.WBls:0000041.control_mean
59.1025From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.53418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
9.27649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
9.57877From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.88105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
34.4918From_analysisRNASeq.briggsae.WBls:0000041.control_median
40.8739From_analysisRNASeq.briggsae.WBls:0000041.control_mean
65.6619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
93.7874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.3871From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.8174From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
15.8772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.9349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.30607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
11.6467From_analysisRNASeq.briggsae.WBls:0000063.control_mean
14.3473From_analysisRNASeq.briggsae.WBls:0000063.control_median
17.9448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.5543From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.8324From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.1143From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.9784From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (18)
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans nlp-73.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19338
Corresponding_CDS_historyCBG19338:bp194
CBG19338:bp255
Corresponding_transcriptCBG19338.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1055156
Microarray_resultsGPL8303_CB6_WBGene00038580_A
GPL8303_CB6_WBGene00038580_B
GPL14143_CBG19338_106-165_0.652_11_C
GPL14143_CBG19338_181-240_0.739_4_A
GPL14143_CBG19338_250-309_0.820_1_B
MethodGene