WormBase Tree Display for Gene: WBGene00038557

WBGene00038557 SMap: S_parent: Sequence: cb25.fpc4126
  Identity: Version: 1
    Name: Sequence_name: CBG19312
      Molecular_name: CBG19312
        CBG19312.1
        CBP11135
      Other_name: CBG_19312 Accession_evidence: NDB HE601047
      Public_name: CBG19312
    DB_info: Database: NDB locus_tag CBG_19312
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:08 WBPerson1971 Event: Imported: Initial conversion from brigace
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 0.503377 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.28817 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.66991 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.69121 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.641736 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        1.12656 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.15582 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0.176056 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.352111 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.11737 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 1.76852 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        1.90511 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        2.0417 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        1.49947 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        1.71318 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        1.87969 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        2.37556 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 0.907858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        1.07927 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        1.27787 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        1.42018 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        1.80057 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        1.91218 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        2.18095 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        2.7697 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0.466899 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
      WBls:0000027 0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        2.65209 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        7.95627 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.40932 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2.69373 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.81864 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.623633 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.098146 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.350645 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        1.07685 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.16841 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1.80305 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        2.4218 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.218246 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.25191 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.379497 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.507084 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.73562 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.96525 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        3.18788 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3.25311 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.86867 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        6.70752 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.290566 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.416585 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.465978 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.570268 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.291457 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.295911 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.356248 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 0.507084 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.28705 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.632685 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.55908 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (23)
    Paralog: WBGene00029661 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031395 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037943 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00270689 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: Cystine-knot cytokine. Is an ortholog of C. elegans F25B3.2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG19312
    Corresponding_CDS_history: CBG19312:bp194
      CBG19312:bp255
    Corresponding_transcript: CBG19312.1
    Other_sequence: CR06518
  Experimental_info: Expr_pattern: Expr1051579
    Microarray_results: GPL8303_CB6_WBGene00038557_A
      GPL8303_CB6_WBGene00038557_B
      GPL14143_CBG19312_147-206_0.888_15_C
      GPL14143_CBG19312_827-886_0.896_11_A
      GPL14143_CBG19312_1000-1059_0.954_1_B
  Method: Gene