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WormBase Tree Display for Gene: WBGene00038509

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Name Class

WBGene00038509SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-ucp-4From_analysisInferred_from_orthology
Sequence_nameCBG19253
Molecular_nameCBG19253
CBG19253.1
CBP32525
Other_nameCBG_19253Accession_evidenceNDBHE601047
Public_nameCbr-ucp-4
DB_infoDatabaseNDBlocus_tagCBG_19253
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ucp-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classucp
AlleleWBVar00127322
WBVar00127323
WBVar00127324
WBVar00127325
WBVar00057099
RNASeq_FPKMWBls:000000213.9379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.6069From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.9499From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
16.933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
15.9516From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.4415From_analysisRNASeq.briggsae.WBls:0000002.control_median
16.9858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000318.8151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
21.767From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
24.719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
21.4246From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
21.6529From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000410.8726From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
12.4402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
9.30496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
11.4257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
11.5448From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
12.2556From_analysisRNASeq.briggsae.WBls:0000004.control_mean
16.5622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.596595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.8602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.5959From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.01756From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.79463From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.01152From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.99337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000357.32552From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.4448From_analysisRNASeq.briggsae.WBls:0000038.control_median
10.7344From_analysisRNASeq.briggsae.WBls:0000038.control_mean
10.9615From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
18.6222From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.42582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.92802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004110.0847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
24.4723From_analysisRNASeq.briggsae.WBls:0000041.control_mean
28.5091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
28.6519From_analysisRNASeq.briggsae.WBls:0000041.control_median
28.7947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
30.5009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.5438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
12.8302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
20.5439From_analysisRNASeq.briggsae.WBls:0000041.control_mean
20.6696From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006311.5927From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
14.3114From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.1701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.4582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
11.859From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.1905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
13.7509From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010111.8602From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.8784From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.2321From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.1309From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (32)
Paralog (34)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Mitochondrial carrier domain superfamily; Mitochondrial substrate/solute carrier; and Mitochondrial carrier protein. Is an ortholog of C. elegans ucp-4. In C. elegans, ucp-4 is involved in response to cold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19253
Corresponding_CDS_historyCBG19253:bp194
Corresponding_transcriptCBG19253.1
Other_sequence (19)
Experimental_infoExpr_patternExpr1057976
Microarray_resultsGPL8303_CB6_WBGene00038509_A
GPL8303_CB6_WBGene00038509_B
GPL8303_CB6_WBGene00038509_C
GPL14143_CBG19253_563-622_0.918_9_C
GPL14143_CBG19253_732-791_0.949_1_A
GPL14143_CBG19253_815-874_0.942_3_B
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene