WormBase Tree Display for Gene: WBGene00038483

WBGene00038483 SMap: S_parent: Sequence: cb25.fpc4126
  Identity: Version: 1
    Name: Sequence_name: CBG19225
      Molecular_name: CBG19225
        CBG19225.1
        CBP40813
      Other_name: CBG_19225 Accession_evidence: NDB HE601047
      Public_name: CBG19225
    DB_info: Database: NDB locus_tag CBG_19225
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:08 WBPerson1971 Event: Imported: Initial conversion from brigace
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 0 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
            RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.06984 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.139681 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.04656 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0.085183 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.170366 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.034073 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 0 From_analysis (12)
      WBls:0000027 0.032244 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.096733 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        0.024183 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 0 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.134891 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.269783 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.595256 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        2.11124 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.028577 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.051311 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.052996 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.054681 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.151227 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.470339 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.115814 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.164793 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.176946 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.206906 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.028534 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.142671 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.023779 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 0.12191 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.103138 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00141974
      00141975
    Ortholog (31)
    Paralog: WBGene00024923 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00032450 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00024849 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037768 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037815 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037833 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of C. elegans C02H6.1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG19225
    Corresponding_CDS_history: CBG19225:bp194
      CBG19225:bp255
    Corresponding_transcript: CBG19225.1
  Experimental_info: Expr_pattern: Expr1053692
    Microarray_results: GPL8303_CB6_WBGene00038483_A
      GPL8303_CB6_WBGene00038483_B
      GPL14143_CBG19225_501-560_0.888_44_C
      GPL14143_CBG19225_702-761_0.884_48_B
      GPL14143_CBG19225_797-856_0.953_4_A
    Expression_cluster: WBPaper00058955:heatshock_upregulated_CBG
  Method: Gene