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WormBase Tree Display for Gene: WBGene00038481

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Name Class

WBGene00038481SMapS_parentSequencecb25.fpc4126
IdentityVersion1
NameSequence_nameCBG19223
Molecular_nameCBG19223
CBG19223.1
CBP11102
Other_nameCBG_19223Accession_evidenceNDBHE601047
Public_nameCBG19223
DB_infoDatabaseNDBlocus_tagCBG_19223
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000023.96369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.13586From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.42048From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.0234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.81536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.55573From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.69208From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000031.45966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.59089From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.72211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.941832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.37453From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000412.1125From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
12.2907From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
12.4689From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
11.5955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
11.7594From_analysisRNASeq.briggsae.WBls:0000004.control_mean
12.7154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.90487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.205724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.58661From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.76715From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.50911From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.384034From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.985322From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.92137From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.7513From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.738516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.787437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.52078From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.25412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.22375From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.11491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.91521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.96405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.11704From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.19402From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.27003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.62678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.64316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.0696From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.09906From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.17514From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.65034From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.66922From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.70077From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.30128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.88303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.98525From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.15748From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.44099From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.25412From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.58742From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.26207From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.96451From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141973
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to be located in nucleus. Is an ortholog of C. elegans C24B5.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19223
Corresponding_CDS_historyCBG19223:bp194
Corresponding_transcriptCBG19223.1
Other_sequence (37)
Experimental_infoExpr_patternExpr1065209
Expr1067751
Microarray_resultsGPL8303_CB6_WBGene00038481_A
GPL8303_CB6_WBGene00038481_B
GPL8303_CB6_WBGene00038481_C
GPL8303_CB6_WBGene00038481_D
GPL8303_CB6_WBGene00038481_E
GPL14143_CBG19223_649-708_0.899_22_B
GPL14143_CBG19223_790-849_0.961_1_A
GPL14143_CBG19223_872-931_0.954_2_C
GPL14143_CBG27187_43-102_0.933_1_A
MethodGene