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WormBase Tree Display for Gene: WBGene00038451

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Name Class

WBGene00038451SMapS_parentSequencecb25.fpc4126
IdentityVersion1
NameSequence_nameCBG19188
Molecular_nameCBG19188
CBG19188.1
CBP04460
Other_nameCBG_19188Accession_evidenceNDBHE601047
Public_nameCBG19188
DB_infoDatabaseNDBlocus_tagCBG_19188
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.89654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.10204From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.4798From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.44083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.20911From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.99929From_analysisRNASeq.briggsae.WBls:0000002.control_median
2.16213From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.138283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.308579From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.478875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.558789From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.05921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.803348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.50934From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.21534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
2.28866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.54403From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.63413From_analysisRNASeq.briggsae.WBls:0000004.control_mean
3.31925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.413749From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.31779From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.53963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.97669From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.44696From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.83446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.66561From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.355938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.18571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.35145From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.78466From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.38361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.48053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.820087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.21859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.65091From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.08323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.06671From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.14494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
10.9977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
22.3074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.11409From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.59532From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630.706075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.929506From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.03697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.063From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.64245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.983238From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.20047From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.88783From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.89654From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.94857From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.01483From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.84095From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (30)
ParalogWBGene00028699Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028703Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029641Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032329Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032958Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033546Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035598Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036477Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042441Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: C2 domain superfamily. Is an ortholog of C. elegans T27E4.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19188
Corresponding_CDS_historyCBG19188:bp194
Corresponding_transcriptCBG19188.1
Other_sequenceCJC13313_1
Experimental_infoExpr_patternExpr1058449
Microarray_resultsGPL8303_CB6_WBGene00038451_A
GPL8303_CB6_WBGene00038451_B
GPL8303_CB6_WBGene00038451_C
GPL8303_CB6_WBGene00038451_D
GPL8303_CB6_WBGene00038451_E
GPL14143_CBG19188_396-455_0.916_19_B
GPL14143_CBG19188_514-573_0.938_9_A
GPL14143_CBG19188_856-915_0.957_1_C
MethodGene