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WormBase Tree Display for Gene: WBGene00038346

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Name Class

WBGene00038346SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-txt-17From_analysisInferred_from_orthology
Sequence_nameCBG19068
Molecular_nameCBG19068
CBG19068.1
CBP19529
Other_nameCBG_19068Accession_evidenceNDBHE601047
Public_nameCbr-txt-17
DB_infoDatabaseNDBlocus_tagCBG_19068
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
204 Feb 2020 15:43:57WBPerson1983Name_changeCGC_nameCbr-txt-17
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtxt
RNASeq_FPKMWBls:000000252.4499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
62.2841From_analysisRNASeq.briggsae.WBls:0000002.control_mean
63.2535From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
71.1488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
57.5238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
60.3886From_analysisRNASeq.briggsae.WBls:0000002.control_median
61.094From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.0503From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.1006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.08883From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.16588From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.52815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
1.6734From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.81864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.3734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.45222From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.09781From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.31664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002716.014From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
162.293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.71162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
61.3395From_analysisRNASeq.briggsae.WBls:0000027.control_mean
146.467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
81.2405From_analysisRNASeq.briggsae.WBls:0000027.control_median
82.6214From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035146.598From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038122.462From_analysisRNASeq.briggsae.WBls:0000038.control_mean
127.521From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.0223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
171.932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
221.782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
83.1109From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004118.1037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
207.334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
25.3237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
28.5625From_analysisRNASeq.briggsae.WBls:0000041.control_median
31.8012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
70.6406From_analysisRNASeq.briggsae.WBls:0000041.control_mean
119.568From_analysisRNASeq.briggsae.WBls:0000041.control_median
158.235From_analysisRNASeq.briggsae.WBls:0000041.control_mean
273.505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
393.344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
26.9235From_analysisRNASeq.briggsae.WBls:0000063.control_mean
30.9081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
31.9985From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
35.2641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
36.4469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
106.408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
33.6313From_analysisRNASeq.briggsae.WBls:0000063.control_median
40.1709From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101105.715From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
35.2641From_analysisRNASeq.briggsae.total_over_all_stages.control_median
106.613From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
35.8555From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (37)
ParalogWBGene00027408Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027421Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027422Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038342Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038344Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Domain of unknown function (DUF4473) and Protein of unknown function DUF4473. Is an ortholog of C. elegans txt-17.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19068
Corresponding_CDS_historyCBG19068:bp194
CBG19068:bp255
Corresponding_transcriptCBG19068.1
Other_sequenceCJC02177_1
CRC02288_1
CSC00902_1
FD517752.1
CJC16731_1
FD514723.1
Experimental_infoExpr_patternExpr1061685
Microarray_resultsGPL8303_CB6_WBGene00038346_A
GPL8303_CB6_WBGene00038346_B
GPL14143_CBG19068_192-251_0.943_7_C
GPL14143_CBG19068_261-320_0.958_1_A
GPL14143_CBG19068_308-367_0.947_6_B
MethodGene