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WormBase Tree Display for Gene: WBGene00038301

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Name Class

WBGene00038301SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-clik-1From_analysisInferred_from_orthology
Sequence_nameCBG19014
Molecular_nameCBG19014
CBG19014.1
CBP04530
Other_nameCBG_19014Accession_evidenceNDBHE601047
Public_nameCbr-clik-1
DB_infoDatabaseNDBlocus_tagCBG_19014
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
212 Sep 2014 16:59:55WBPerson2970Name_changeCGC_nameCbr-clik-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclik
RNASeq_FPKMWBls:00000021159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
382.355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
503.675From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
681.677From_analysisRNASeq.briggsae.WBls:0000002.control_mean
342.269From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
443.015From_analysisRNASeq.briggsae.WBls:0000002.control_median
596.825From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.896908From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
19.511From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
38.125From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
26.0438From_analysisRNASeq.briggsae.WBls:0000003.control_mean
39.1096From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004259.866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
263.117From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
266.368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
269.786From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
269.992From_analysisRNASeq.briggsae.WBls:0000004.control_mean
273.363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
280.578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:0000027158.173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
323.827From_analysisRNASeq.briggsae.WBls:0000027.control_mean
352.998From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
460.309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
406.654From_analysisRNASeq.briggsae.WBls:0000027.control_median
410.508From_analysisRNASeq.briggsae.WBls:0000027.control_mean
670.552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035571.872From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038353.597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
635.33From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
651.413From_analysisRNASeq.briggsae.WBls:0000038.control_mean
679.699From_analysisRNASeq.briggsae.WBls:0000038.control_median
724.068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
892.656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041135.71From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
269.74From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
271.62From_analysisRNASeq.briggsae.WBls:0000041.control_median
273.5From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
303.561From_analysisRNASeq.briggsae.WBls:0000041.control_mean
535.293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
232.729From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
310.708From_analysisRNASeq.briggsae.WBls:0000041.control_mean
417.278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
422.789From_analysisRNASeq.briggsae.WBls:0000063.control_mean
517.652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
525.463From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
529.296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
541.532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
358.752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
412.116From_analysisRNASeq.briggsae.WBls:0000063.control_mean
521.557From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:0000101408.412From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
419.11From_analysisRNASeq.briggsae.total_over_all_stages.control_median
370.553From_analysisRNASeq.briggsae.total_over_all_stages.control_median
387.588From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (29)
ParalogWBGene00029225Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033088Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033441Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033672Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035326Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036614Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039390Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Calponin family repeat and Calponin repeat. Is an ortholog of C. elegans clik-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19014
Corresponding_CDS_historyCBG19014:bp194
Corresponding_transcriptCBG19014.1
Other_sequence (237)
Experimental_infoExpr_patternExpr1063236
Microarray_resultsGPL8303_CB6_WBGene00038301_A
GPL8303_CB6_WBGene00038301_B
GPL14143_CBG19014_534-593_0.899_15_A
GPL14143_CBG19014_746-805_0.929_2_B
GPL14143_CBG19014_949-1008_0.918_6_C
MethodGene