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WormBase Tree Display for Gene: WBGene00037861

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Name Class

WBGene00037861SMapS_parentSequencecb25.fpc4087
IdentityVersion2
NameCGC_nameCbr-lin-31From_analysisInferred_from_orthology
Sequence_nameCBG18439
Molecular_nameCBG18439
CBG18439.1
CBP04362
Other_nameCBG_18439Accession_evidenceNDBHE601503
Public_nameCbr-lin-31
DB_infoDatabaseNDBlocus_tagCBG_18439
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-lin-31
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
AlleleWBVar00126381
WBVar00126382
RNASeq_FPKMWBls:00000020.490621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.816254From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.22486From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.3677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.628461From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.722358From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.07576From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.099529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.114619From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.12971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.241966From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.496659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.12845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.27474From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.42103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
1.28073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.45732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.47434From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.08417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.108742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.257978From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.11374From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.97449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.625063From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.992147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
1.83334From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350.717701From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.332895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.557517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.918788From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.19218From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.28006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.59823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.142498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.202477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.233512From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.264547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.397294From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.979655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.364854From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.451591From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.46516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.65521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.168702From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.323849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.519661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.094898From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.172218From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.189796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.519661From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.987972From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.538818From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.971075From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141416
00141417
00141418
Ortholog (28)
Paralog (11)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans lin-31. In C. elegans, lin-31 is involved in vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18439
Corresponding_CDS_historyCBG18439:bp194
Corresponding_transcriptCBG18439.1
Other_sequenceGR12061
FC540606.1
CV200930.1
Acan_isotig11162
Oden_isotig20815
Hbac_isotig03213
ACC18989_1
Dviv_isotig22537
GRC00772_1
Experimental_infoExpr_patternExpr1067435
Microarray_resultsGPL8303_CB6_WBGene00037861_A
GPL8303_CB6_WBGene00037861_B
GPL14143_CBG18439_68-127_0.912_9_B
GPL14143_CBG18439_629-688_0.894_23_C
MethodGene