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WormBase Tree Display for Gene: WBGene00037554

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Name Class

WBGene00037554SMapS_parentSequencecb25.fpc4079a
IdentityVersion3
NameCGC_nameCbr-ceh-43From_analysisInferred_from_orthology
Sequence_nameCBG18062
Molecular_nameCBG18062
CBG18062.1
CBP10854
Other_nameCBG_18062Accession_evidenceNDBHE600963
Public_nameCbr-ceh-43
DB_infoDatabaseNDBlocus_tagCBG_18062
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-ceh-43
326 Jul 2013 13:54:15WBPerson2970Name_changeCGC_nameCbr-ceh-43
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classceh
RNASeq_FPKMWBls:000000210.3187From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
10.6265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.4083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.11783From_analysisRNASeq.briggsae.WBls:0000002.control_mean
10.4726From_analysisRNASeq.briggsae.WBls:0000002.control_median
12.4697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.9558From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003107.486From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
110.73From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
113.974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
103.593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
108.351From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004105.824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
109.641From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
113.458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
102.239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
110.101From_analysisRNASeq.briggsae.WBls:0000004.control_mean
113.967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
115.019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.02451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.21612From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.65639From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.72853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
10.3204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.97232From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.32239From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000358.51487From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.06994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.0872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.35943From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.63165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.05767From_analysisRNASeq.briggsae.WBls:0000038.control_mean
8.44191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004114.4976From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.6613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
16.8376From_analysisRNASeq.briggsae.WBls:0000041.control_median
18.0139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
18.7381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.57715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
11.9102From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.9955From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.14098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.32963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000632.61742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.32503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.62152From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.04191From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.49525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.15033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.05838From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.56934From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.20648From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010122.1239From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.51487From_analysisRNASeq.briggsae.total_over_all_stages.control_median
29.4705From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.52361From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00140997
Ortholog (31)
ParalogWBGene00032327Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00086652Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00087469Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans ceh-43. In C. elegans, ceh-43 is involved in dopaminergic neuron differentiation and embryo development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18062
Corresponding_CDS_historyCBG18062:bp194
Corresponding_transcriptCBG18062.1
Other_sequenceJI170941.1
NB10575
Dviv_isotig14983
Oden_isotig26553
Oden_isotig23815
Dviv_isotig14984
Experimental_infoExpr_patternExpr1056110
Microarray_resultsGPL8303_CB6_WBGene00037554_A
GPL8303_CB6_WBGene00037554_B
GPL8303_CB6_WBGene00037554_C
GPL8303_CB6_WBGene00037554_D
GPL8303_CB6_WBGene00037554_E
GPL14143_CBG18062_217-276_0.724_65_B
GPL14143_CBG18062_358-417_0.729_62_A
GPL14143_CBG18062_523-582_0.815_33_C
MethodGene