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WormBase Tree Display for Gene: WBGene00037484

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Name Class

WBGene00037484SMapS_parentSequencecb25.fpc4079a
IdentityVersion2
NameCGC_nameCbr-mel-28From_analysisInferred_from_orthology
Sequence_nameCBG17984
Molecular_nameCBG17984
CBG17984.1
CBP10823
Other_nameCBG_17984Accession_evidenceNDBHE600963
Public_nameCbr-mel-28
DB_infoDatabaseNDBlocus_tagCBG_17984
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-mel-28
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmel
RNASeq_FPKMWBls:00000026.90613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
7.14667From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.83086From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.43977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.74463From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.8093From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.0264From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000346.2634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
50.7906From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
55.3178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
26.4062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
42.6625From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000424.6206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
26.7012From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
28.7818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
23.6906From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
25.2688From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
26.5661From_analysisRNASeq.briggsae.WBls:0000004.control_mean
30.4689From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.635345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.4681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.13458From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.07934From_analysisRNASeq.briggsae.WBls:0000027.control_mean
14.1891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.10678From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.16184From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003514.1795From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.923827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
10.6834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
11.0526From_analysisRNASeq.briggsae.WBls:0000038.control_median
11.4217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
16.1183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.78681From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000412.34347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.46666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.9718From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.20392From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.47693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.52862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.86871From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.00278From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.74722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.64936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.25171From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.48985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.59213From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.6962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.84627From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.20148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.64417From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.99063From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.71239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.5244From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.14667From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.397From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.29322From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (20)
ParalogWBGene00041775Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00024875Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030176Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030935Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans mel-28. In C. elegans, mel-28 is involved in mitotic sister chromatid segregation and nuclear pore complex assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17984
Corresponding_CDS_historyCBG17984:bp194
Corresponding_transcriptCBG17984.1
Other_sequence (13)
Experimental_infoExpr_patternExpr1069049
Microarray_resultsGPL8303_CB6_WBGene00037484_A
GPL8303_CB6_WBGene00037484_B
GPL14143_CBG17984_733-792_0.768_168_B
GPL14143_CBG17984_1737-1796_0.769_166_C
GPL14143_CBG17984_3775-3834_0.854_37_A
ReferenceWBPaper00028456
MethodGene