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WormBase Tree Display for Gene: WBGene00037305

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Name Class

WBGene00037305SMapS_parentSequencecb25.fpc4071
IdentityVersion2
NameCGC_nameCbr-col-71From_analysisInferred_from_orthology
Sequence_nameCBG17762
Molecular_nameCBG17762
CBG17762.1
CBP28921
Other_nameCBG_17762Accession_evidenceNDBHE601475
Public_nameCbr-col-71
DB_infoDatabaseNDBlocus_tagCBG_17762
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-col-71
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
RNASeq_FPKMWBls:0000002124.27From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
38.7672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
64.05From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
75.6957From_analysisRNASeq.briggsae.WBls:0000002.control_mean
51.4086From_analysisRNASeq.briggsae.WBls:0000002.control_median
58.913From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.56464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.72715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.80287From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.87859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
1.84123From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.91794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.076158From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.152316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.082274From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.082697From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.176356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.429087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.733715From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.09228From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.11403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.28659From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.30162From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.86952From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.946832From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.6064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.06267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
144.918From_analysisRNASeq.briggsae.WBls:0000038.control_median
155.435From_analysisRNASeq.briggsae.WBls:0000038.control_mean
279.23From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
330.841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041108.715From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.1206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
345.766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
40.5289From_analysisRNASeq.briggsae.WBls:0000041.control_median
64.9372From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.03762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
102.127From_analysisRNASeq.briggsae.WBls:0000041.control_mean
117.283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
60.6161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
62.7766From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063104.208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
114.962From_analysisRNASeq.briggsae.WBls:0000063.control_mean
183.225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
93.7043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
96.7181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
96.9538From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
8.55348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
96.836From_analysisRNASeq.briggsae.WBls:0000063.control_median
97.2271From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010164.4547From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.03762From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.07583From_analysisRNASeq.briggsae.total_over_all_stages.control_median
54.4276From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00140766
Ortholog (28)
Paralog (155)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-71. In C. elegans, col-71 is involved in collagen and cuticulin-based cuticle development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17762
Corresponding_CDS_historyCBG17762:bp194
Corresponding_transcriptCBG17762.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1053337
Microarray_resultsGPL8303_CB6_WBGene00037305_A
GPL8303_CB6_WBGene00037305_B
GPL14143_CBG17762_503-562_0.670_74_C
GPL14143_CBG17762_731-790_0.858_2_B
GPL14143_CBG17762_961-1020_0.859_1_A
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene