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WormBase Tree Display for Gene: WBGene00037235

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Name Class

WBGene00037235SMapS_parentSequencecb25.fpc4069d
IdentityVersion2
NameCGC_nameCbr-swd-2.1From_analysisInferred_from_orthology
Sequence_nameCBG17670
Molecular_nameCBG17670
CBG17670.1
CBP18988
Other_nameCBG_17670Accession_evidenceNDBHE600976
Public_nameCbr-swd-2.1
DB_infoDatabaseNDBlocus_tagCBG_17670
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
211 Nov 2008 17:09:12WBPerson2970Name_changeCGC_nameCbr-swd-2.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classswd
RNASeq_FPKMWBls:000000221.1454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
24.8554From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.1135From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
27.3073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
26.7104From_analysisRNASeq.briggsae.WBls:0000002.control_median
28.0183From_analysisRNASeq.briggsae.WBls:0000002.control_mean
37.5071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000372.134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
76.1199From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
80.1058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
76.7968From_analysisRNASeq.briggsae.WBls:0000003.control_mean
78.1505From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000435.5901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
36.6586From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
37.7272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
31.7391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
34.1056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
36.2291From_analysisRNASeq.briggsae.WBls:0000004.control_mean
41.9836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.122915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.31138From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.58679From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.32606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.56606From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.64527From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.82073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.99238From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.2117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.53836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.18559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.43815From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.50127From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.81694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004124.7347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
51.9916From_analysisRNASeq.briggsae.WBls:0000041.control_mean
60.189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
60.4153From_analysisRNASeq.briggsae.WBls:0000041.control_median
60.6416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
62.4013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
38.99From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
39.3949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
47.7253From_analysisRNASeq.briggsae.WBls:0000041.control_mean
49.792From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006314.3011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.1977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.5907From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
16.9318From_analysisRNASeq.briggsae.WBls:0000063.control_mean
19.1494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
19.4203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
17.8701From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.4781From_analysisRNASeq.briggsae.WBls:0000063.control_mean
26.2097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010115.1977From_analysisRNASeq.briggsae.total_over_all_stages.control_median
23.0343From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
20.2829From_analysisRNASeq.briggsae.total_over_all_stages.control_median
26.3131From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (34)
ParalogWBGene00037234Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Anaphase-promoting complex subunit 4, WD40 domain; WD domain, G-beta repeat; Anaphase-promoting complex subunit 4 WD40 domain; WD40-repeat-containing domain superfamily; WD40/YVTN repeat-like-containing domain superfamily; and WD40 repeat. Is an ortholog of C. elegans swd-2.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17670
Corresponding_CDS_historyCBG17670:bp194
Corresponding_transcriptCBG17670.1
Other_sequenceCBC11271_1
CBC13532_1
CJC00376_1
CSC02099_1
CGC01107_1
FD517322.1
Experimental_infoExpr_patternExpr1065954
Microarray_resultsGPL8303_CB6_WBGene00037235_A
GPL8303_CB6_WBGene00037235_B
GPL14143_CBG17670_474-533_0.915_19_A
GPL14143_CBG17670_620-679_0.924_10_C
GPL14143_CBG17670_642-701_0.935_6_B
MethodGene