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WormBase Tree Display for Gene: WBGene00037095

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Name Class

WBGene00037095SMapS_parentSequencecb25.fpc4069b
IdentityVersion2
NameCGC_nameCbr-gen-1From_analysisInferred_from_orthology
Sequence_nameCBG17486
Molecular_nameCBG17486
CBG17486.1
CBP38638
Other_nameCBG_17486Accession_evidenceNDBHE600955
Public_nameCbr-gen-1
DB_infoDatabaseNDBlocus_tagCBG_17486
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
203 Aug 2010 10:24:05WBPerson2970Name_changeCGC_nameCbr-gen-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgen
RNASeq_FPKMWBls:000000210.0814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
14.4176From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
16.9567From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.3712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
13.9223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
14.1699From_analysisRNASeq.briggsae.WBls:0000002.control_median
16.1981From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000310.9066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
11.1938From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
11.481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
12.4907From_analysisRNASeq.briggsae.WBls:0000003.control_mean
15.0845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.1333From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
10.6863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
9.58028From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
10.4545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
8.62013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
8.76036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
9.62031From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000271.01249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
20.6916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.69485From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.46631From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.59407From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.72305From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.49328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003513.9404From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.9778From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.5283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
15.0279From_analysisRNASeq.briggsae.WBls:0000038.control_mean
31.6701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.48606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.42731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004114.8095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
18.6517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
18.7649From_analysisRNASeq.briggsae.WBls:0000041.control_median
18.878From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
20.7616From_analysisRNASeq.briggsae.WBls:0000041.control_mean
30.7073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
21.9254From_analysisRNASeq.briggsae.WBls:0000041.control_median
22.9942From_analysisRNASeq.briggsae.WBls:0000041.control_mean
24.9728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
29.9456From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006327.5947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
30.2425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
32.4599From_analysisRNASeq.briggsae.WBls:0000063.control_mean
33.3279From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
33.3561From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
37.7783From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
18.0281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
30.0546From_analysisRNASeq.briggsae.WBls:0000063.control_mean
31.7852From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010114.8095From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.0664From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
14.6136From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.4528From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00140515
00140516
00140517
Ortholog (22)
ParalogWBGene00033574Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035319Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040054Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and nuclease activity. Is an ortholog of C. elegans gen-1. In C. elegans, gen-1 is involved in DNA damage response and negative regulation of nematode larval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17486
Corresponding_CDS_historyCBG17486:bp194
CBG17486:bp255
Corresponding_transcriptCBG17486.1
Other_sequenceCJC11994_1
CRC01733_1
MA02746
Oden_isotig10028
Oden_isotig10029
CR04857
Oden_isotig10027
Experimental_infoExpr_patternExpr1052731
Microarray_resultsGPL8303_CB6_WBGene00037095_A
GPL8303_CB6_WBGene00037095_B
GPL8303_CB6_WBGene00037095_C
GPL14143_CBG17486_629-688_0.709_103_C
GPL14143_CBG17486_649-708_0.769_84_B
GPL14143_CBG17486_1115-1174_0.945_6_A
MethodGene