Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00037012

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00037012SMapS_parentSequencecb25.fpc4069a
IdentityVersion2
NameCGC_nameCbr-asm-2From_analysisInferred_from_orthology
Sequence_nameCBG17365
Molecular_nameCBG17365
CBG17365.1
CBP41893
Other_nameCBG_17365Accession_evidenceNDBHE600924
Public_nameCbr-asm-2
DB_infoDatabaseNDBlocus_tagCBG_17365
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-asm-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classasm
AlleleWBVar00023317
WBVar00023332
WBVar00023322
WBVar00023337
WBVar00023327
WBVar00023342
RNASeq_FPKMWBls:000000212.5836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
16.3043From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
19.3305From_analysisRNASeq.briggsae.WBls:0000002.control_mean
29.1036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
14.4439From_analysisRNASeq.briggsae.WBls:0000002.control_median
14.9462From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.79332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.177146From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.354293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.3177From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.598806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.377414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.525961From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.674508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.324965From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.46102From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.501062From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.667401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.128774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.153055From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.716453From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.86753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.01029From_analysisRNASeq.briggsae.WBls:0000027.control_median
26.0601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.05236From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003536.1372From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.789946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
14.6686From_analysisRNASeq.briggsae.WBls:0000038.control_median
15.3741From_analysisRNASeq.briggsae.WBls:0000038.control_mean
24.0137From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
31.3692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.32353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000414.83403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.2652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.45167From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.54966From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.83413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
7.87334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
17.4976From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.96605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6.90009From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.21173From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006311.2834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.21225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
6.86506From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.69163From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
9.13802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
12.7885From_analysisRNASeq.briggsae.WBls:0000063.control_mean
42.4057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
8.41483From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010112.7857From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.21225From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.2779From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.6502From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00140427
00140428
00140429
00140430
Ortholog (35)
ParalogWBGene00024820Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031105Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032346Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable sphingomyelin phosphodiesterase activity. Predicted to be involved in sphingomyelin catabolic process. Is an ortholog of C. elegans asm-2. In C. elegans, asm-2 is involved in ceramide biosynthetic process and sphingomyelin catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17365
Corresponding_CDS_historyCBG17365:bp194
CBG17365:bp255
Corresponding_transcriptCBG17365.1
Other_sequence (31)
Experimental_infoExpr_patternExpr1066410
Microarray_resultsGPL8303_CB6_WBGene00037012_A
GPL8303_CB6_WBGene00037012_B
GPL14143_CBG17365_1389-1448_0.723_92_B
GPL14143_CBG17365_1528-1587_0.776_24_A
GPL14143_CBG17365_1680-1739_0.796_6_C
MethodGene