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WormBase Tree Display for Gene: WBGene00036973

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Name Class

WBGene00036973SMapS_parentSequencecb25.fpc4069a
IdentityVersion2
NameCGC_nameCbr-selt-1.1From_analysisInferred_from_orthology
Sequence_nameCBG17303
Molecular_nameCBG17303
CBG17303.1
CBP31950
Other_nameCBG_17303Accession_evidenceNDBHE600924
Public_nameCbr-selt-1.1
DB_infoDatabaseNDBlocus_tagCBG_17303
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
229 Nov 2016 12:34:27WBPerson2970Name_changeCGC_nameCbr-selt-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classselt
Allele (12)
RNASeq_FPKMWBls:000000212.9696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
16.3391From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
18.13From_analysisRNASeq.briggsae.WBls:0000002.control_mean
25.0812From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
13.4831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
14.9111From_analysisRNASeq.briggsae.WBls:0000002.control_median
16.9683From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000314.9913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
18.7487From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
22.5061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
16.3075From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
17.935From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000430.3391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
34.6925From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
39.0459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
28.629From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
29.3856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
32.0267From_analysisRNASeq.briggsae.WBls:0000004.control_mean
32.7338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.18994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
18.8428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.87104From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.96793From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.1435From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.2706From_analysisRNASeq.briggsae.WBls:0000027.control_median
16.6702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003521.0101From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.6495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
16.6908From_analysisRNASeq.briggsae.WBls:0000038.control_median
17.35From_analysisRNASeq.briggsae.WBls:0000038.control_mean
17.732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
28.5779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.44061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004111.2175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
11.6273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
11.9455From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.2638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
12.4989From_analysisRNASeq.briggsae.WBls:0000041.control_mean
14.887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
13.5754From_analysisRNASeq.briggsae.WBls:0000041.control_median
13.7278From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.7904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
16.5806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.3924From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
12.3075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
13.2201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.11431From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.65154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
11.3499From_analysisRNASeq.briggsae.WBls:0000063.control_median
12.8134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
9.73082From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010114.887From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.5702From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.7199From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.6824From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (29)
ParalogWBGene00271260Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Selenoprotein T; Rdx family; Thioredoxin-like superfamily; and Selenoprotein, Rdx-type. Is an ortholog of C. elegans selt-1.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17303
Corresponding_CDS_historyCBG17303:bp194
Corresponding_transcriptCBG17303.1
Other_sequence (32)
Experimental_infoExpr_patternExpr1054396
Microarray_resultsGPL8303_CB6_WBGene00036973_A
GPL8303_CB6_WBGene00036973_B
GPL14143_CBG17303_409-468_0.831_36_B
GPL14143_CBG17303_614-673_0.887_1_C
GPL14143_CBG17303_645-704_0.834_33_A
MethodGene