WormBase Tree Display for Gene: WBGene00036703

WBGene00036703 SMap: S_parent: Sequence: cb25.fpc4044d
  Identity: Version: 2
    Name: CGC_name: Cbr-vem-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG16897
      Molecular_name: CBG16897
        CBG16897.1
        CBP10372
      Other_name: CBG_16897 Accession_evidence: NDB HE601001
      Public_name: Cbr-vem-1
    DB_info: Database: NDB locus_tag CBG_16897
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:06 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-vem-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vem
    RNASeq_FPKM: WBls:0000002 44.341 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        47.7465 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        54.9809 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        72.8551 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        37.1109 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        46.0438 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        50.5134 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 58.3045 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        77.9806 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        97.6567 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        61.3862 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        72.4491 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 73.9832 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        74.3081 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        74.6329 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        78.3324 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        79.2265 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        80.2657 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        95.1534 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 19.9519 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        27.9816 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        56.8128 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        7.18019 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        26.673 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        29.3347 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        33.3941 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 40.0295 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 23.1468 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        44.7083 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        50.7732 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        55.8806 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        67.0529 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        68.1848 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 30.275 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        33.7851 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        36.7604 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        37.2532 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        39.7357 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        45.2168 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        42.4762 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        47.5917 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        56.0682 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        80.4694 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 16.8975 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        19.2838 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        19.9248 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        22.5534 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        22.7253 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        19.6706 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        21.2391 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        33.5364 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 44.7083 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        44.8334 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        45.1846 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        48.8117 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (30)
    Paralog: WBGene00035898 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037581 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Cytochrome b5-like heme/steroid binding domain; Cytochrome b5-like Heme/Steroid binding domain; and Cytochrome b5-like heme/steroid binding domain superfamily. Is an ortholog of C. elegans vem-1. In C. elegans, vem-1 is involved in innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG16897
    Corresponding_CDS_history: CBG16897:bp194
    Corresponding_transcript: CBG16897.1
    Other_sequence (30)
  Experimental_info: Expr_pattern: Expr1058712
    Microarray_results: GPL8303_CB6_WBGene00036703_A
      GPL8303_CB6_WBGene00036703_B
      GPL14143_CBG16897_161-220_0.834_8_A
      GPL14143_CBG16897_410-469_0.913_1_B
      GPL14143_CBG16897_499-558_0.890_3_C
  Method: Gene