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WormBase Tree Display for Gene: WBGene00036560

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Name Class

WBGene00036560SMapS_parentSequencecb25.fpc4044a
IdentityVersion1
NameSequence_nameCBG16681
Molecular_nameCBG16681
CBG16681.1
CBP03985
Other_nameCBG_16681Accession_evidenceNDBHE600949
Public_nameCBG16681
DB_infoDatabaseNDBlocus_tagCBG_16681
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000257.0905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
66.8264From_analysisRNASeq.briggsae.WBls:0000002.control_mean
68.4661From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
74.9225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
18.368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
54.7118From_analysisRNASeq.briggsae.WBls:0000002.control_mean
62.7783From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003104.552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
119.115From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
133.678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
100.459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
112.896From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004232.785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
238.429From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
244.073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
220.606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
227.762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
231.755From_analysisRNASeq.briggsae.WBls:0000004.control_mean
233.551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002725.6859From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.61401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
65.3226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.12118From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
16.9149From_analysisRNASeq.briggsae.WBls:0000027.control_median
24.7086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
25.4416From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035201.687From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038114.698From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
31.035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
60.6831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
62.8885From_analysisRNASeq.briggsae.WBls:0000038.control_median
65.0938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
67.8775From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004117.96From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
19.5595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
21.1684From_analysisRNASeq.briggsae.WBls:0000041.control_median
22.7774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
25.0218From_analysisRNASeq.briggsae.WBls:0000041.control_mean
39.7903From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
31.0951From_analysisRNASeq.briggsae.WBls:0000041.control_mean
31.2838From_analysisRNASeq.briggsae.WBls:0000041.control_median
40.6266From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
45.8571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006312.239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
12.4483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
13.8309From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
13.8858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.5455From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.3235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
13.8583From_analysisRNASeq.briggsae.WBls:0000063.control_median
16.4636From_analysisRNASeq.briggsae.WBls:0000063.control_mean
21.0541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010160.6831From_analysisRNASeq.briggsae.total_over_all_stages.control_median
71.9108From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
58.8868From_analysisRNASeq.briggsae.total_over_all_stages.control_median
79.4317From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139970
00139971
Contained_in_operonCBOPA0403
Ortholog (31)
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable protein disulfide isomerase activity. Predicted to be located in endoplasmic reticulum lumen. Is an ortholog of C. elegans C14B9.2. In C. elegans, C14B9.2 is involved in IRE1-mediated unfolded protein response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16681
Corresponding_CDS_historyCBG16681:bp194
Corresponding_transcriptCBG16681.1
Other_sequence (77)
Experimental_infoExpr_patternExpr1050152
Microarray_resultsGPL8303_CB6_WBGene00036560_A
GPL8303_CB6_WBGene00036560_B
GPL14143_CBG16681_1460-1519_0.934_4_C
GPL14143_CBG16681_1652-1711_0.949_1_B
GPL14143_CBG16681_1757-1816_0.949_2_A
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_downregulated
MethodGene