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WormBase Tree Display for Gene: WBGene00036428

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Name Class

WBGene00036428SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-lin-37From_analysisInferred_from_orthology
Sequence_nameCBG16515
Molecular_nameCBG16515
CBG16515.1
CBP04029
Other_nameCBG_16515Accession_evidenceNDBHE600949
Public_nameCbr-lin-37
DB_infoDatabaseNDBlocus_tagCBG_16515
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-lin-37
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
AlleleWBVar00124027
WBVar00124028
WBVar00124029
WBVar00124030
RNASeq_FPKMWBls:000000239.4188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
40.0075From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
40.6975From_analysisRNASeq.briggsae.WBls:0000002.control_mean
42.6662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
41.3368From_analysisRNASeq.briggsae.WBls:0000002.control_median
51.7158From_analysisRNASeq.briggsae.WBls:0000002.control_mean
84.7708From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003160.949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
167.122From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
173.296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
161.674From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
165.306From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004130.129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
132.717From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
135.305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
119.344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
127.49From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
128.118From_analysisRNASeq.briggsae.WBls:0000004.control_mean
128.32From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000271.57855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
20.4169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.19771From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.73105From_analysisRNASeq.briggsae.WBls:0000027.control_mean
11.1611From_analysisRNASeq.briggsae.WBls:0000027.control_mean
11.3245From_analysisRNASeq.briggsae.WBls:0000027.control_median
15.4512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003517.3262From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.2386From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
15.4762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
17.0089From_analysisRNASeq.briggsae.WBls:0000038.control_median
17.1618From_analysisRNASeq.briggsae.WBls:0000038.control_mean
18.5415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
23.3907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004125.5005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
65.8678From_analysisRNASeq.briggsae.WBls:0000041.control_mean
78.3517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
78.7665From_analysisRNASeq.briggsae.WBls:0000041.control_median
79.1813From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
80.4376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
43.9557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
53.3584From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
60.1309From_analysisRNASeq.briggsae.WBls:0000041.control_mean
65.855From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006334.0544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
35.3343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
36.8232From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
37.0468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
39.1315From_analysisRNASeq.briggsae.WBls:0000063.control_mean
52.399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
36.935From_analysisRNASeq.briggsae.WBls:0000063.control_median
39.3623From_analysisRNASeq.briggsae.WBls:0000063.control_mean
40.5163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010134.0544From_analysisRNASeq.briggsae.total_over_all_stages.control_median
48.0326From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
38.2328From_analysisRNASeq.briggsae.total_over_all_stages.control_median
57.048From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139837
Ortholog (26)
Structured_descriptionAutomated_descriptionPredicted to be part of transcription repressor complex. Is an ortholog of C. elegans lin-37. In C. elegans, lin-37 is involved in embryonic digestive tract morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16515
Corresponding_CDS_historyCBG16515:bp194
Corresponding_transcriptCBG16515.1
Other_sequenceBE132546.1
CR03225
CBC08526_1
AI124451.1
CRC10552_1
HC07698
OVC00987_1
AI061541.1
Experimental_infoExpr_patternExpr1065917
Microarray_resultsGPL8303_CB6_WBGene00036428_A
GPL8303_CB6_WBGene00036428_B
GPL14143_CBG16515_337-396_0.876_57_C
GPL14143_CBG16515_406-465_0.943_9_A
GPL14143_CBG16515_585-644_0.956_5_B
MethodGene