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WormBase Tree Display for Gene: WBGene00036408

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Name Class

WBGene00036408SMapS_parentSequencecb25.fpc4044a
IdentityVersion1
NameSequence_nameCBG16488
Molecular_nameCBG16488
CBG16488.1
CBP18706
Other_nameCBG_16488Accession_evidenceNDBHE600949
Public_nameCBG16488
DB_infoDatabaseNDBlocus_tagCBG_16488
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000215.8049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
16.8177From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
30.0577From_analysisRNASeq.briggsae.WBls:0000002.control_mean
57.5506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
20.2022From_analysisRNASeq.briggsae.WBls:0000002.control_median
23.5867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
28.44From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000328.925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
35.3654From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
41.8058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
23.5347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
31.4218From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000443.6385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
45.214From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
46.7895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
31.1284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
43.5939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
45.3923From_analysisRNASeq.briggsae.WBls:0000004.control_mean
61.8114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.3884From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
16.2714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
5.8866From_analysisRNASeq.briggsae.WBls:0000027.control_mean
14.1742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.7813From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.9585From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003511.9536From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.3623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
15.6248From_analysisRNASeq.briggsae.WBls:0000038.control_mean
16.5198From_analysisRNASeq.briggsae.WBls:0000038.control_median
18.6772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
25.338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.12155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004133.5257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
35.8193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
38.8405From_analysisRNASeq.briggsae.WBls:0000041.control_median
39.9827From_analysisRNASeq.briggsae.WBls:0000041.control_mean
41.8618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
48.7242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
144.291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
45.293From_analysisRNASeq.briggsae.WBls:0000041.control_median
61.8321From_analysisRNASeq.briggsae.WBls:0000041.control_mean
66.7704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.5509From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.9934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
15.1155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.75241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
7.79017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.10314From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
11.0483From_analysisRNASeq.briggsae.WBls:0000063.control_median
11.2891From_analysisRNASeq.briggsae.WBls:0000063.control_mean
14.9799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010116.2714From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.7977From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
18.2278From_analysisRNASeq.briggsae.total_over_all_stages.control_median
27.7896From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139799
00139800
00139801
Ortholog (34)
ParalogWBGene00034823Caenorhabditis briggsaeFrom_analysisInparanoid_8
Structured_descriptionAutomated_descriptionPredicted to enable FMN binding activity and pyridoxamine phosphate oxidase activity. Predicted to be involved in pyridoxine biosynthetic process. Is an ortholog of C. elegans F57B9.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16488
Corresponding_CDS_historyCBG16488:bp194
CBG16488:bp255
Corresponding_transcriptCBG16488.1
Other_sequence (34)
Experimental_infoExpr_patternExpr1051574
Microarray_resultsGPL8303_CB6_WBGene00036408_A
GPL14143_CBG16488_198-257_0.887_30_B
GPL14143_CBG16488_287-346_0.935_7_A
GPL14143_CBG16488_551-610_0.931_9_C
MethodGene