WormBase Tree Display for Gene: WBGene00035968

WBGene00035968 SMap: S_parent: Sequence: cb25.fpc4030b
  Identity: Version: 2
    Name: CGC_name: Cbr-dnj-27 From_analysis: Inferred_from_orthology
      Sequence_name: CBG15846
      Molecular_name: CBG15846
        CBG15846.1
        CBP36696
      Other_name: CBG_15846 Accession_evidence: NDB HE600911
      Public_name: Cbr-dnj-27
    DB_info: Database: NDB locus_tag CBG_15846
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:05 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-dnj-27
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dnj
    Allele (19)
    RNASeq_FPKM: WBls:0000002 13.4747 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        14.9664 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        18.0732 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        25.7785 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        14.2205 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        14.7563 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        4.80542 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 24.2387 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        31.1023 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        37.9659 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        24.956 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        29.0535 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 55.6247 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        59.1346 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        62.6445 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        50.6192 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        56.8189 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        57.0895 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        59.74 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.707394 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        21.3607 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        3.02915 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        8.36575 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5.37818 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        7.72722 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        8.20612 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 45.7169 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 13.626 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        15.7831 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        16.6767 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        19.7274 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        22.2517 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        7.52727 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 7.44633 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        7.6314 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        7.70605 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        7.78069 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        7.83342 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        8.47527 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        7.15155 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        7.71574 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        7.80921 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 1.72956 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        2.44862 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        2.74275 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        2.84126 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3.14336 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        4.14201 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.94305 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        3.36189 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        5.96506 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 13.626 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        18.9951 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        13.5504 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        20.4329 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (35)
    Paralog: WBGene00026157 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026912 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027017 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027863 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028405 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029211 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032209 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032898 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034991 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042650 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Thioredoxin; DnaJ domain; Thioredoxin domain; Chaperone J-domain superfamily; and Thioredoxin-like superfamily. Is an ortholog of C. elegans dnj-27. In C. elegans, dnj-27 is involved in IRE1-mediated unfolded protein response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG15846
    Corresponding_CDS_history: CBG15846:bp194
    Corresponding_transcript: CBG15846.1
    Other_sequence (21)
  Experimental_info: Expr_pattern: Expr1061729
    Microarray_results: GPL8303_CB6_WBGene00035968_A
      GPL8303_CB6_WBGene00035968_B
      GPL14143_CBG15846_2118-2177_0.933_4_B
      GPL14143_CBG15846_2204-2263_0.922_7_C
      GPL14143_CBG15846_2276-2335_0.963_1_A
  Method: Gene