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WormBase Tree Display for Gene: WBGene00035907

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Name Class

WBGene00035907SMapS_parentSequencecb25.fpc4030a2
IdentityVersion3
NameCGC_nameCbr-cox-5AFrom_analysisInferred_from_orthology
Sequence_nameCBG15765
Molecular_nameCBG15765a
CBG15765a.1
CBP10033
CBG15765b
CBP47014
CBG15765b.1
Other_nameCBG_15765Accession_evidenceNDBHE600979
Cbr-cco-2From_analysisInferred_from_orthology
Public_nameCbr-cox-5A
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-cco-2
306 Sep 2017 09:35:13WBPerson2970Name_changeCGC_nameCbr-cox-5A
Other_nameCbr-cco-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcox
RNASeq_FPKMWBls:0000002735.642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
819.907From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
830.433From_analysisRNASeq.briggsae.WBls:0000002.control_mean
935.749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
490.243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
745.385From_analysisRNASeq.briggsae.WBls:0000002.control_mean
777.774From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003664.872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
667.146From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
669.421From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
642.718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
659.004From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004389.546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
416.253From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
442.959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
276.296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
435.939From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
450.205From_analysisRNASeq.briggsae.WBls:0000004.control_mean
706.286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027305.624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
376.614From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
445.932From_analysisRNASeq.briggsae.WBls:0000027.control_mean
655.557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1116.9From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
516.086From_analysisRNASeq.briggsae.WBls:0000027.control_median
613.674From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351105.43From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381039.75From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1042.97From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1073.35From_analysisRNASeq.briggsae.WBls:0000038.control_median
1106.96From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1502.67From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
522.493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411078.41From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1558.87From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
828.697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
960.488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
963.032From_analysisRNASeq.briggsae.WBls:0000041.control_median
965.576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1164.85From_analysisRNASeq.briggsae.WBls:0000041.control_median
1182.32From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1364.13From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1416.17From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063423.542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
447.74From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
455.49From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
514.808From_analysisRNASeq.briggsae.WBls:0000063.control_mean
549.989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
697.277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
502.74From_analysisRNASeq.briggsae.WBls:0000063.control_median
549.118From_analysisRNASeq.briggsae.WBls:0000063.control_mean
720.668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101697.277From_analysisRNASeq.briggsae.total_over_all_stages.control_median
789.511From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
701.781From_analysisRNASeq.briggsae.total_over_all_stages.control_median
791.189From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139360
00139361
00139362
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to be involved in mitochondrial electron transport, cytochrome c to oxygen. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial respiratory chain complex IV. Is an ortholog of C. elegans cox-5A. In C. elegans, cox-5A is involved in mitochondrial electron transport, cytochrome c to oxygen.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15765a
CBG15765b
Corresponding_CDS_historyCBG15765:bp194
Corresponding_transcriptCBG15765a.1
CBG15765b.1
Other_sequence (142)
Experimental_infoExpr_patternExpr1055228
Microarray_resultsGPL8303_CB6_WBGene00035907_A
GPL8303_CB6_WBGene00035907_B
GPL14143_CBG15765_136-195_0.841_19_B
GPL14143_CBG15765_298-357_0.954_1_C
GPL14143_CBG15765_441-500_0.924_4_A
MethodGene