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WormBase Tree Display for Gene: WBGene00035884

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Name Class

WBGene00035884SMapS_parentSequencecb25.fpc4030a2
IdentityVersion2
NameCGC_nameCbr-lgc-37From_analysisInferred_from_orthology
Sequence_nameCBG15739
Molecular_nameCBG15739
CBG15739.1
CBP43527
Other_nameCBG_15739Accession_evidenceNDBHE600979
Public_nameCbr-lgc-37
DB_infoDatabaseNDBlocus_tagCBG_15739
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:50WBPerson2970Name_changeCGC_nameCbr-lgc-37
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
RNASeq_FPKMWBls:00000020.672024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.07624From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.2746From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.28209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.0687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.07435From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.17165From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.019211From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.038422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.012807From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.025216From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.126081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.167728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.497951From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.01629From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.38319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.44057From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.51083From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.99444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.13741From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.128506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.42427From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.49326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.52144From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.54962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.52569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.073404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.117338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.140434From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.163529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.414483From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.30366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.494042From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.599379From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.824555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.11379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.272173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.308191From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.346494From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.523384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.628721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.415787From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.519183From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.38263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.523384From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.953218From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.576052From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.925093From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139331
00139332
00139333
00139334
00139335
00139336
Ortholog (30)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-37.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15739
Corresponding_CDS_historyCBG15739:bp255
Corresponding_transcriptCBG15739.1
Other_sequenceFE909332.1
JI178843.1
HCC00028_1
FC811369.1
HC05802
JI212647.1
JO470397.1
ASC02761_1
AS10821
Experimental_infoExpr_patternExpr1052158
Microarray_resultsGPL8303_CB6_WBGene00035884_A
GPL8303_CB6_WBGene00035884_B
GPL14143_CBG15739_611-670_0.873_25_B
GPL14143_CBG15739_852-911_0.905_15_A
GPL14143_CBG15739_1014-1073_0.918_13_C
MethodGene