WormBase Tree Display for Gene: WBGene00035870

WBGene00035870 SMap: S_parent: Sequence: cb25.fpc4030a2
  Identity: Version: 2
    Name: CGC_name: Cbr-cox-17 From_analysis: Inferred_from_orthology
      Sequence_name: CBG15725
      Molecular_name: CBG15725
        CBG15725.1
        CBP18491
      Other_name: CBG_15725 Accession_evidence: NDB HE600979
      Public_name: Cbr-cox-17
    DB_info: Database: NDB locus_tag CBG_15725
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:05 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 25 Jan 2013 14:33:12 WBPerson2970 Name_change: CGC_name: Cbr-cox-17
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cox
    RNASeq_FPKM: WBls:0000002 118.118 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        199.289 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        67.2872 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        87.7774 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        134.707 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        136.125 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        184.473 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 136.767 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        184.32 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        89.2133 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        104.212 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        39.1015 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 46.5703 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        46.8577 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        47.1451 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        167.486 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        53.3856 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        61.4692 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        75.2112 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 (12)
      WBls:0000027 13.7362 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        22.865 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        35.629 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        70.2857 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        126.223 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        46.5754 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        58.2775 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 102.2 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 129.894 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        135.774 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        136.225 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        136.675 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        212.912 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        34.2161 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 109.669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        123.663 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        130.02 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        131.461 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        139.259 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        147.487 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        108.037 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        125.466 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        125.897 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        127.27 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 147.792 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        20.4355 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        26.703 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        45.8511 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        65.5014 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        86.7256 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        56.7998 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        65.876 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        67.7485 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 86.7256 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        90.4406 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        87.2515 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        93.6308 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00139317
      00139318
      00139319
    Ortholog: WBGene00018240 Caenorhabditis elegans From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065360 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CSP26.g69 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      FL83_18632 Caenorhabditis latens From_analysis: WormBase-Compara
      WBGene00258946 Strongyloides ratti From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable copper chaperone activity and copper ion binding activity. Predicted to be located in mitochondrial intermembrane space. Is an ortholog of C. elegans cox-17. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG15725
    Corresponding_transcript: CBG15725.1
    Other_sequence (23)
  Experimental_info: Expr_pattern: Expr1058594
    Microarray_results: GPL8303_CB6_WBGene00035870_A
      GPL8303_CB6_WBGene00035870_B
      GPL14143_CBG15725_19-78_0.935_3_B
      GPL14143_CBG15725_119-178_0.968_1_A
      GPL14143_CBG15725_123-182_0.967_2_C
    Expression_cluster: WBPaper00059178:Cbr-spr-4(gu163)_downregulated
  Method: Gene