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WormBase Tree Display for Gene: WBGene00035654

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Name Class

WBGene00035654SMapS_parentSequencecb25.fpc4022
IdentityVersion2
NameCGC_nameCbr-timm-23From_analysisInferred_from_orthology
Sequence_nameCBG15355
Molecular_nameCBG15355
CBG15355.1
CBP03734
Other_nameCBG_15355Accession_evidenceNDBHE601520
Public_nameCbr-timm-23
DB_infoDatabaseNDBlocus_tagCBG_15355
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
212 Apr 2013 17:13:08WBPerson2970Name_changeCGC_nameCbr-timm-23
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtimm
RNASeq_FPKMWBls:000000284.6963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
92.7393From_analysisRNASeq.briggsae.WBls:0000002.control_mean
93.9082From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
99.6135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
42.4118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
80.1574From_analysisRNASeq.briggsae.WBls:0000002.control_mean
89.3023From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000348.5174From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
59.6194From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
70.7214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
51.7554From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
56.9981From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000452.3206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
56.9692From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
61.6178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
48.5941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
62.6925From_analysisRNASeq.briggsae.WBls:0000004.control_mean
75.3774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
75.5524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002716.9295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
47.1509From_analysisRNASeq.briggsae.WBls:0000027.control_mean
50.0526From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
74.4705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
103.612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
61.2662From_analysisRNASeq.briggsae.WBls:0000027.control_mean
62.2616From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:0000035101.382From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038110.733From_analysisRNASeq.briggsae.WBls:0000038.control_median
122.557From_analysisRNASeq.briggsae.WBls:0000038.control_mean
132.514From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
192.18From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
76.5796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
88.953From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041103.264From_analysisRNASeq.briggsae.WBls:0000041.control_median
105.161From_analysisRNASeq.briggsae.WBls:0000041.control_mean
106.907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
135.141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
78.9742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
99.6214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
117.13From_analysisRNASeq.briggsae.WBls:0000041.control_mean
118.99From_analysisRNASeq.briggsae.WBls:0000041.control_median
131.073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
151.064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063101.896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
81.7745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
85.8407From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
91.9155From_analysisRNASeq.briggsae.WBls:0000063.control_mean
92.9451From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
97.1214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
80.1023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
89.3929From_analysisRNASeq.briggsae.WBls:0000063.control_median
89.9467From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010188.6001From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
88.953From_analysisRNASeq.briggsae.total_over_all_stages.control_median
85.3921From_analysisRNASeq.briggsae.total_over_all_stages.control_median
87.6038From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (30)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domain: Tim17/Tim22/Tim23/Pmp24 family. Is an ortholog of C. elegans timm-23. In C. elegans, timm-23 is involved in protein import into mitochondrial matrix.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15355
Corresponding_CDS_historyCBG15355:bp194
Corresponding_transcriptCBG15355.1
Other_sequence (55)
Experimental_infoExpr_patternExpr1063934
Microarray_resultsGPL8303_CB6_WBGene00035654_A
GPL8303_CB6_WBGene00035654_B
GPL14143_CBG15355_271-330_0.848_6_B
GPL14143_CBG15355_424-483_0.928_1_A
GPL14143_CBG15355_676-735_0.640_41_C
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene