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WormBase Tree Display for Gene: WBGene00035579

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Name Class

WBGene00035579SMapS_parentSequencecb25.fpc4010
IdentityVersion1
NameSequence_nameCBG15265
Molecular_nameCBG15265
CBG15265.1
CBP03652
Other_nameCBG_15265Accession_evidenceNDBHE601055
Public_nameCBG15265
DB_infoDatabaseNDBlocus_tagCBG_15265
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000228.7617From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
30.0855From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
39.7174From_analysisRNASeq.briggsae.WBls:0000002.control_mean
60.305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
21.3237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
29.4236From_analysisRNASeq.briggsae.WBls:0000002.control_median
35.119From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000317.4026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
17.7952From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
18.1877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
14.5397From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
16.71From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000470.9781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
71.4404From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
71.9026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
67.7357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
71.9127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
72.0072From_analysisRNASeq.briggsae.WBls:0000004.control_mean
77.5071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000272.4953From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
30.4199From_analysisRNASeq.briggsae.WBls:0000027.control_mean
80.3352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
8.42919From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
42.6577From_analysisRNASeq.briggsae.WBls:0000027.control_mean
43.9001From_analysisRNASeq.briggsae.WBls:0000027.control_median
79.371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003532.5567From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003835.1526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
40.6125From_analysisRNASeq.briggsae.WBls:0000038.control_mean
41.0853From_analysisRNASeq.briggsae.WBls:0000038.control_median
47.018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.83472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
73.4446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.4468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
13.7218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
13.8594From_analysisRNASeq.briggsae.WBls:0000041.control_median
13.997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
18.0277From_analysisRNASeq.briggsae.WBls:0000041.control_mean
33.9453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
23.9711From_analysisRNASeq.briggsae.WBls:0000041.control_median
25.8279From_analysisRNASeq.briggsae.WBls:0000041.control_mean
36.8394From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
46.0174From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006311.9036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
13.1235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
16.197From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
16.1994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.6877From_analysisRNASeq.briggsae.WBls:0000063.control_mean
26.0152From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
16.1982From_analysisRNASeq.briggsae.WBls:0000063.control_median
16.7342From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.9663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010128.7617From_analysisRNASeq.briggsae.total_over_all_stages.control_median
34.1651From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
31.3211From_analysisRNASeq.briggsae.total_over_all_stages.control_median
37.4474From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (29)
ParalogWBGene00026851Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035631Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038804Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040065Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042146Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: TB2/DP1/HVA22-related protein and TB2/DP1, HVA22 family. Is an ortholog of C. elegans T19C3.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15265
Corresponding_CDS_historyCBG15265:bp194
Corresponding_transcriptCBG15265.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1064772
Microarray_resultsGPL8303_CB6_WBGene00035579_A
GPL8303_CB6_WBGene00035579_B
GPL14143_CBG15265_2-61_0.816_46_B
GPL14143_CBG15265_284-343_0.909_15_C
GPL14143_CBG15265_386-445_0.939_4_A
MethodGene