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WormBase Tree Display for Gene: WBGene00035563

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Name Class

WBGene00035563SMapS_parentSequencecb25.fpc4010
IdentityVersion4
NameCGC_nameCbr-grk-2From_analysisInferred_from_orthology
Sequence_nameCBG15249
Molecular_nameCBG15249
CBG15249.1
CBP46379
Other_nameCBG_15249Accession_evidenceNDBHE601055
Public_nameCbr-grk-2
DB_infoDatabaseNDBlocus_tagCBG_15249
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-grk-2
301 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameRemoved
404 Feb 2020 15:43:56WBPerson1983Name_changeCGC_nameCbr-grk-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgrk
RNASeq_FPKMWBls:00000022.76823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.26853From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.42241From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.23048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.946208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.80336From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.01838From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.905795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
1.51124From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.11669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.8667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.29639From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000042.94574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.94969From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.95363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
3.13259From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
3.71498From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.14676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.39619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.377328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.45559From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.09774From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.4603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.13384From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.34888From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.24216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.90193From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.433441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.83918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.37143From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.91968From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.00019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.21293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.587816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.884508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.931305From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.978102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.36884From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.02495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.68312From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.83692From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.38813From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.141029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.393153From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.445386From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.460889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.918459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.453137From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.567099From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.43683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.76823From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.80645From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.8037From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.89738From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (32)
ParalogWBGene00025109Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036413Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042648Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: RGS domain; RGS domain superfamily; Regulator of G protein signaling domain; and Protein kinase-like domain superfamily. Is an ortholog of C. elegans grk-2. In C. elegans, grk-2 is involved in several processes, including positive regulation of egg-laying behavior; positive regulation of growth rate; and serotonin catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15249
Corresponding_CDS_historyCBG15249:bp194
CBG15249:bp255
Corresponding_transcriptCBG15249.1
Other_sequence (29)
Experimental_infoExpr_patternExpr1060997
Microarray_resultsGPL14143_CBG15249_200-259_0.878_22_C
GPL14143_CBG15249_392-451_0.910_6_B
GPL14143_CBG15249_543-602_0.888_16_A
Remark[191001 pad] The CGC name Cbr-grk-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene