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WormBase Tree Display for Gene: WBGene00035332

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Name Class

WBGene00035332SMapS_parentSequencecb25.fpc3857b
IdentityVersion2
NameCGC_nameCbr-fog-1From_analysisInferred_from_orthology
Sequence_nameCBG14960
Molecular_nameCBG14960a
CBG14960a.1
CBP18142
CBG14960b
CBP42480
CBG14960b.1
Other_nameCBG_14960Accession_evidenceNDBHE600904
Public_nameCbr-fog-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-fog-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfog
RNASeq_FPKMWBls:00000022.78472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.53806From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.74576From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.9145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.6887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.66139From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.23149From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000314.9426From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
26.0654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.81973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
11.3625From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.20251From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.524493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.739103From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.953713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.15501From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.15691From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.39712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.7542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:00000240.055848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
0.076559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
0.081675From_analysisRNASeq.briggsae.WBls:0000024.control_median
0.086792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
0.11357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
0.160792From_analysisRNASeq.briggsae.WBls:0000024.control_mean
0.423971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
0.770045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
0.18262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
WBls:00000270.0639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.151904From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.277882From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.617841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.194735From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.237566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.267803From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.89058From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.5926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
17.2855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.76517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.42627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.50943From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.01738From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004120.1433From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.67006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.70524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.09694From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.48865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
68.7094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
36.599From_analysisRNASeq.briggsae.WBls:0000041.control_median
44.2297From_analysisRNASeq.briggsae.WBls:0000041.control_mean
87.0279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
97.7769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006316.5971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
18.0581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
22.3782From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
22.8098From_analysisRNASeq.briggsae.WBls:0000063.control_mean
23.1623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
33.8535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
19.3399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
20.8591From_analysisRNASeq.briggsae.WBls:0000063.control_median
22.2315From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001013.67006From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.64345From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
13.0326From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.22739From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00138815
00138816
00138817
00138818
00138819
Ortholog (27)
ParalogWBGene00040861Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00025614Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026813Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031597Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable mRNA 3'-UTR binding activity and translation regulator activity. Predicted to be involved in regulation of translation. Is an ortholog of C. elegans fog-1. In C. elegans, fog-1 is involved in cell fate specification; germ-line sex determination; and spermatogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14960a
CBG14960b
Corresponding_CDS_historyCBG14960:bp194
CBG14960:bp212
Corresponding_transcriptCBG14960a.1
CBG14960b.1
Other_sequence (87)
Experimental_infoExpr_patternExpr1051853
Microarray_resultsGPL8303_CB6_WBGene00035332_A
GPL8303_CB6_WBGene00035332_B
GPL14143_CBG14960_1166-1225_0.874_27_C
GPL14143_CBG14960_1270-1329_0.872_29_A
GPL14143_CBG14960_1415-1474_0.888_17_B
ReferenceWBPaper00064734
MethodGene