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WormBase Tree Display for Gene: WBGene00035229

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Name Class

WBGene00035229SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-nnt-1From_analysisInferred_from_orthology
Sequence_nameCBG14838
Molecular_nameCBG14838
CBG14838.1
CBP03484
Other_nameCBG_14838Accession_evidenceNDBHE600983
Public_nameCbr-nnt-1
DB_infoDatabaseNDBlocus_tagCBG_14838
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nnt-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnnt
RNASeq_FPKMWBls:000000214.6806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
16.3832From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.669From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
17.8001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
13.7272From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.6748From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.75912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.74619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.34144From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.9367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.36741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.01677From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000047.03851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
8.14235From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.24618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.46805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.63391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
7.03795From_analysisRNASeq.briggsae.WBls:0000004.control_mean
7.80309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.12059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
12.9019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.72017From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.91422From_analysisRNASeq.briggsae.WBls:0000027.control_mean
21.5053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.31104From_analysisRNASeq.briggsae.WBls:0000027.control_median
9.81199From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003524.8438From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.6133From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.14411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
15.6774From_analysisRNASeq.briggsae.WBls:0000038.control_mean
16.0723From_analysisRNASeq.briggsae.WBls:0000038.control_median
21.5314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
29.4209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000414.79485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.19641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.37714From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.55788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.70819From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.28361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
22.273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.34094From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
8.70496From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.96283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.03685From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.73296From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.75917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.72928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
10.4597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
4.74607From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.10732From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010111.4924From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.03851From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.0703From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.08125From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00138711
00138712
Ortholog (27)
Structured_descriptionAutomated_descriptionPredicted to enable NAD(P)+ transhydrogenase activity. Predicted to be involved in proton transmembrane transport. Is an ortholog of C. elegans nnt-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14838
Corresponding_CDS_historyCBG14838:bp194
CBG14838:bp255
Corresponding_transcriptCBG14838.1
Other_sequence (80)
Experimental_infoExpr_patternExpr1066408
Microarray_resultsGPL8303_CB6_WBGene00035229_A
GPL8303_CB6_WBGene00035229_B
GPL14143_CBG14838_1680-1739_0.789_28_B
GPL14143_CBG14838_2596-2655_0.809_1_C
GPL14143_CBG14838_3179-3238_0.802_5_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene