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WormBase Tree Display for Gene: WBGene00035214

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Name Class

WBGene00035214SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-ggr-2From_analysisInferred_from_orthology
Sequence_nameCBG14823
Molecular_name (15)
Other_nameCBG_14823Accession_evidenceNDBHE600983
Cbr-ggr-2From_analysisInferred_from_orthology
Public_nameCbr-ggr-2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ggr-2
328 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-lgc-58
Other_nameCbr-ggr-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classggr
RNASeq_FPKMWBls:00000020.667304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.0875From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.15406From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.70737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.832947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.960223From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.07378From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.205619From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.411237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.412807From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.827185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.44217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
2.01425From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.58632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.00573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.11565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.35965From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.5019From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000270.426785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.588846From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.05118From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.13791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.36338From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.48465From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.78505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.43497From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.206512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.00291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.29795From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.59299From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.99168From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.16431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.221148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.260485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.271102From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.281719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.860891From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.68021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.977899From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.14894From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.67408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.217796From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.219809From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.361762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.507411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.290785From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.357184From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.05412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.667304From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.47378From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.02992From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.45184From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138693
00138694
00138695
00138696
00138697
00138698
Ortholog (29)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-58.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14823a
CBG14823b
CBG14823c
CBG14823d
CBG14823e
Corresponding_CDS_historyCBG14823:bp194
Corresponding_transcriptCBG14823a.1
CBG14823b.1
CBG14823c.1
CBG14823d.1
CBG14823e.1
Other_sequenceAcan_isotig17985
MI08899
Oden_isotig18827
Experimental_infoExpr_patternExpr1069263
Microarray_resultsGPL8303_CB6_WBGene00035214_A
GPL8303_CB6_WBGene00035214_B
GPL14143_CBG14823_85-144_0.810_4_C
GPL14143_CBG14823_320-379_0.775_32_B
GPL14143_CBG14823_816-875_0.814_2_A
MethodGene