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WormBase Tree Display for Gene: WBGene00035213

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Name Class

WBGene00035213SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-ptr-4From_analysisInferred_from_orthology
Sequence_nameCBG14821
Molecular_nameCBG14821
CBG14821.1
CBP38971
Other_nameCBG_14821Accession_evidenceNDBHE600983
Public_nameCbr-ptr-4
DB_infoDatabaseNDBlocus_tagCBG_14821
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ptr-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classptr
RNASeq_FPKMWBls:000000233.6589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
35.9804From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
40.9108From_analysisRNASeq.briggsae.WBls:0000002.control_mean
53.0932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
33.0444From_analysisRNASeq.briggsae.WBls:0000002.control_mean
34.8196From_analysisRNASeq.briggsae.WBls:0000002.control_median
9.4453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000312.5914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.19067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
7.39104From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
7.65795From_analysisRNASeq.briggsae.WBls:0000003.control_mean
8.19179From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000486.4114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
90.2345From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
94.0576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
84.2765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
89.3773From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
89.3935From_analysisRNASeq.briggsae.WBls:0000004.control_mean
92.8447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027140.154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
14.6506From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
53.4451From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.53079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
17.7824From_analysisRNASeq.briggsae.WBls:0000027.control_median
20.9143From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
45.3124From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035167.502From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038159.458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
21.1336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
28.2088From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
63.4871From_analysisRNASeq.briggsae.WBls:0000038.control_median
76.8915From_analysisRNASeq.briggsae.WBls:0000038.control_mean
98.7655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.398432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.824428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
10.046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.03609From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.24776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.12915From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.0123From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.77683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
3.16067From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.67059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.77632From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.78589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.12883From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.33565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.63123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.433452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.55251From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.95736From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010110.046From_analysisRNASeq.briggsae.total_over_all_stages.control_median
41.7936From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
40.1039From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.74565From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00138692
Ortholog (29)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans ptr-4. In C. elegans, ptr-4 is involved in endocytosis and molting cycle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14821
Corresponding_CDS_historyCBG14821:bp194
CBG14821:bp255
Corresponding_transcriptCBG14821.1
Other_sequence (20)
Experimental_infoExpr_patternExpr1062780
Microarray_resultsGPL8303_CB6_WBGene00035213_A
GPL8303_CB6_WBGene00035213_B
GPL14143_CBG14821_2371-2430_0.788_20_C
GPL14143_CBG14821_2641-2700_0.784_28_B
GPL14143_CBG14821_2787-2846_0.770_55_A
MethodGene