WormBase Tree Display for Gene: WBGene00035124

WBGene00035124 SMap: S_parent: Sequence: cb25.fpc3857a
  Identity: Version: 3
    Name: CGC_name: Cbr-octr-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG14708
      Molecular_name: CBG14708
        CBG14708.1
        CBP46326
      Other_name: Cbr-tag-24 From_analysis: Inferred_from_orthology
        CBG_14708 Accession_evidence: NDB HE600983
      Public_name: Cbr-octr-1
    DB_info: Database: NDB locus_tag CBG_14708
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:04 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-tag-24
        3 11 Dec 2009 11:55:24 WBPerson2970 Name_change: CGC_name: Cbr-octr-1
                Other_name: Cbr-tag-24
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: octr
    RNASeq_FPKM: WBls:0000002 0.722604 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.21474 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.25622 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.6654 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.698258 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.989412 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.08562 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.103585 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.20717 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.069057 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0.263704 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.288925 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.314146 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        0.214755 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.406423 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.478492 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.761019 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.18093 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.536986 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.582975 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.03101 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.783998 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.991072 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.21536 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 1.63543 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.138581 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.153669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0.788594 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.954435 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1.42352 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        2.10197 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 0.65744 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.947673 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.979877 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.01208 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.03517 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.52348 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.592672 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        0.791473 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.869573 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.920803 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 0.364129 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0.834058 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.08314 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        1.1744 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        1.54862 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        1.12877 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        1.18176 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        2.9203 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 1.00141 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        1.01208 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.776246 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.992452 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00138628
      00138629
      00138630
    Ortholog (26)
    Paralog: WBGene00026790 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans octr-1. In C. elegans, octr-1 is involved in negative regulation of innate immune response; octopamine signaling pathway; and regulation of IRE1-mediated unfolded protein response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG14708
    Corresponding_CDS_history: CBG14708:bp194
      CBG14708:bp255
    Corresponding_transcript: CBG14708.1
    Other_sequence (14)
  Experimental_info: Expr_pattern: Expr1056767
    Microarray_results: GPL8303_CB6_WBGene00035124_A
      GPL8303_CB6_WBGene00035124_B
      GPL14143_CBG14708_606-665_0.814_7_A
      GPL14143_CBG14708_970-1029_0.817_6_B
      GPL14143_CBG14708_1047-1106_0.591_100_C
  Method: Gene