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WormBase Tree Display for Gene: WBGene00035115

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Name Class

WBGene00035115SMapS_parentSequencecb25.fpc3857a
IdentityVersion1
NameSequence_nameCBG14696
Molecular_nameCBG14696
CBG14696.1
CBP03409
Other_nameCBG_14696Accession_evidenceNDBHE600983
Public_nameCBG14696
DB_infoDatabaseNDBlocus_tagCBG_14696
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00121607
RNASeq_FPKMWBls:0000002103.374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
24.1961From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
44.6092From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.25739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
165.094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
63.785From_analysisRNASeq.briggsae.WBls:0000002.control_median
74.7304From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000314.3144From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
22.4306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
6.19817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
9.54292From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
4.7036From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.4072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
154.093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
32.7From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002713.417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.64324From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.51273From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.4649From_analysisRNASeq.briggsae.WBls:0000027.control_median
253.308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
69.0594From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035154.544From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038125.948From_analysisRNASeq.briggsae.WBls:0000038.control_mean
145.621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
20.3692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
337.8From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
82.9951From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:0000041194.026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
54.6846From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
61.8999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
64.312From_analysisRNASeq.briggsae.WBls:0000041.control_median
66.724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
94.3336From_analysisRNASeq.briggsae.WBls:0000041.control_mean
126.811From_analysisRNASeq.briggsae.WBls:0000041.control_median
134.768From_analysisRNASeq.briggsae.WBls:0000041.control_mean
186.897From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
244.379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063125.156From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
25.558From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
31.7351From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.96135From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
14.576From_analysisRNASeq.briggsae.WBls:0000063.control_median
21.1907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
29.9777From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010122.4306From_analysisRNASeq.briggsae.total_over_all_stages.control_median
69.775From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
23.3134From_analysisRNASeq.briggsae.total_over_all_stages.control_median
80.222From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138622
Contained_in_operonCBOPA0449
OrthologWBGene00164158Caenorhabditis brenneriFrom_analysisWormBase-Compara
CSP28.g10553Caenorhabditis panamensisFrom_analysisWormBase-Compara
Sp34_X0238410Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00020736Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00077862Caenorhabditis remaneiFrom_analysisWormBase-Compara
Paralog (15)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans T23F2.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14696
Corresponding_CDS_historyCBG14696:bp194
Corresponding_transcriptCBG14696.1
Other_sequenceDviv_isotig15366
ACC03927_1
Tcol_isotig13003
Experimental_infoExpr_patternExpr1066433
Microarray_resultsGPL8303_CB6_WBGene00035115_A
GPL8303_CB6_WBGene00035115_B
GPL8303_CB6_WBGene00035190_A
GPL8303_CB6_WBGene00035190_B
GPL14143_CBG14696_65-124_0.547_10_A
GPL14143_CBG14696_75-134_0.517_13_C
GPL14143_CBG14696_78-137_0.534_11_B
MethodGene