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WormBase Tree Display for Gene: WBGene00035080

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Name Class

WBGene00035080SMapS_parentSequencecb25.fpc3857a
IdentityVersion1
NameSequence_nameCBG14652
Molecular_nameCBG14652
CBG14652.1
CBP18081
Other_nameCBG_14652Accession_evidenceNDBHE600983
Public_nameCBG14652
DB_infoDatabaseNDBlocus_tagCBG_14652
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000025.01491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.15134From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.61574From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.68098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.16765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.58313From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.00372From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000312.7859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
13.6362From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
14.4866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
11.9609From_analysisRNASeq.briggsae.WBls:0000003.control_mean
8.61031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.6246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
8.80906From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
9.71683From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
10.2415From_analysisRNASeq.briggsae.WBls:0000004.control_mean
10.2596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
10.7094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
10.8049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002710.2262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.50197From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.90939From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.02137From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.06723From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.54077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000357.24448From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.31102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.13465From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.49181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.80173From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.11165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.62414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000413.93712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.33051From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.40561From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.55762From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.70963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.26967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.46536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.43605From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.82889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.82298From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.19676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.60846From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.62023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.68945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.29828From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.61435From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.67478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001016.20873From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.26967From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.38074From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.47671From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (22)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: UV radiation resistance protein/autophagy-related protein 14 and Vacuolar sorting 38 and autophagy-related subunit 14. Is an ortholog of C. elegans Y34B4A.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14652
Corresponding_CDS_historyCBG14652:bp194
CBG14652:bp255
Corresponding_transcriptCBG14652.1
Other_sequenceTcir_isotig09795
Experimental_infoExpr_patternExpr1068581
Microarray_resultsGPL8303_CB6_WBGene00035080_A
GPL8303_CB6_WBGene00035080_B
GPL14143_CBG14652_487-546_0.784_23_B
GPL14143_CBG14652_605-664_0.858_5_A
GPL14143_CBG14652_679-738_0.876_1_C
MethodGene