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WormBase Tree Display for Gene: WBGene00035070

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Name Class

WBGene00035070SMapS_parentSequencecb25.fpc3857a
IdentityVersion1
NameSequence_nameCBG14642
Molecular_nameCBG14642
CBG14642.1
CBP45026
Other_nameCBG_14642Accession_evidenceNDBHE600983
Public_nameCBG14642
DB_infoDatabaseNDBlocus_tagCBG_14642
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000212.0499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.57944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.22186From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
7.61707From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.62519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.42352From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.8691From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000036.79856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
8.32864From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
9.85871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
7.63086From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
8.09604From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000415.0458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
16.4847From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
17.9236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
12.6275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
15.0245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
15.1958From_analysisRNASeq.briggsae.WBls:0000004.control_mean
15.3578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.645426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.0796From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.11308From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.61423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.29251From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.71117From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.50542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000357.94905From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000382.47159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
4.92From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.5677From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.57586From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.2154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
8.69646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000413.39139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.83097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.02125From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.21153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.45835From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.39953From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.10219From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.10245From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.99337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6.78638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.94269From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.99244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.03442From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.49334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.19324From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.26388From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.29936From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.08272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001016.2154From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.39742From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.2554From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.97787From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (28)
ParalogWBGene00026538Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026614Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027846Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034911Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Spermine/spermidine synthase domain and S-adenosyl-L-methionine-dependent methyltransferase. Is an ortholog of C. elegans Y34B4A.7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14642
Corresponding_CDS_historyCBG14642:bp194
CBG14642:bp255
Corresponding_transcriptCBG14642.1
Other_sequenceAcan_isotig04654
HBC01092_1
FG970757.1
Acan_isotig04457
Hbac_isotig01489
FK802916.1
Experimental_infoExpr_patternExpr1056293
Microarray_resultsGPL8303_CB6_WBGene00035070_A
GPL8303_CB6_WBGene00035070_B
GPL14143_CBG14642_78-137_0.724_76_C
GPL14143_CBG14642_633-692_0.845_3_B
GPL14143_CBG14642_959-1018_0.837_4_A
MethodGene