WormBase Tree Display for Gene: WBGene00035047

WBGene00035047 SMap: S_parent: Sequence: cb25.fpc3857a
  Identity: Version: 2
    Name: CGC_name: Cbr-vit-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG14608
      Molecular_name: CBG14608
        CBG14608.1
        CBP09697
      Other_name: CBG_14608 Accession_evidence: NDB HE600983
      Public_name: Cbr-vit-2
    DB_info: Database: NDB locus_tag CBG_14608
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:04 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:05 WBPerson2970 Name_change: CGC_name: Cbr-vit-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vit
    RNASeq_FPKM: WBls:0000002 1563.63 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        2371.48 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        2621.93 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        2928.87 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        2691.61 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        2775.4 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        3652 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.028873 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.057278 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.085683 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        0.074939 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.110262 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.328537 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.422718 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.516898 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.280609 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.368082 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.385107 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.431408 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 0.062254 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        0.121252 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.184336 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.187061 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        0.187251 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.197574 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        0.247421 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        0.318077 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
        0.072906 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
      WBls:0000027 0.023314 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.221816 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.433357 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.05494 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.04853 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        0.135173 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.33715 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 0.235764 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.167987 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.374985 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.703327 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.03167 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        1.6943 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        5.20257 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 1440.01 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1572.81 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        2875.98 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        3411.21 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        4.03735 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        1050.43 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.672 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        6.84734 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        9.65734 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2496.23 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3055.98 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        3128.55 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        3147.76 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        3148.88 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        2870.31 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3138.16 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        4740.67 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.374985 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        892.995 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.403197 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        902.687 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00138552
      00138553
    Ortholog (37)
    Paralog: WBGene00000365 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00024796 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034777 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034800 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Is an ortholog of C. elegans vit-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG14608
    Corresponding_CDS_history: CBG14608:bp194
      CBG14608:bp214
    Corresponding_transcript: CBG14608.1
    Other_sequence (830)
  Experimental_info: Expr_pattern: Expr1065947
    Microarray_results: GPL8303_CB6_WBGene00035047_A
      GPL8303_CB6_WBGene00035047_B
      GPL14143_CBG14608_1713-1772_0.809_1_C
      GPL14143_CBG14608_3857-3916_0.785_36_B
      GPL14143_CBG14608_4095-4154_0.597_446_A
  Method: Gene