WormBase Tree Display for Gene: WBGene00035001

WBGene00035001 SMap: S_parent: Sequence: cb25.fpc3857a
  Identity: Version: 2
    Name: CGC_name: Cbr-npr-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG14540
      Molecular_name: CBG14540
        CBG14540.1
        CBP18230
      Other_name: CBG_14540 Accession_evidence: NDB HE600983
      Public_name: Cbr-npr-1
    DB_info: Database: NDB locus_tag CBG_14540
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:04 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-npr-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: npr
    RNASeq_FPKM: WBls:0000002 0.773412 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.40987 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.57103 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.88518 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.595044 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        1.17222 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.20617 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.103159 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.208476 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.313792 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.138984 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.249836 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        0.42255 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.595265 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.144053 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.203459 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.315863 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.3867 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.881173 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        2.64352 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.32176 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        1.69171 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        4.12331 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 2.53072 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.262376 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.966753 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        1.34691 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1.42757 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.88839 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        2.27012 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 0.166933 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.224796 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.252142 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.279488 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.280493 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.450753 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.30844 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.320627 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.361766 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.366903 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.256632 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.322884 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.524161 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.833629 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.361418 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.390397 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.554083 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.524161 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.10674 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.418727 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.02186 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00138508
      00138509
      00138510
      00138511
    Ortholog (28)
    Paralog (16)
    Structured_description: Automated_description: Predicted to enable neuropeptide Y receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans npr-1. In C. elegans, npr-1 is involved in several processes, including behavioral response to ethanol; social behavior; and thermotaxis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG14540
    Corresponding_CDS_history: CBG14540:bp194
    Corresponding_transcript: CBG14540.1
    Other_sequence (12)
  Experimental_info: Expr_pattern: Expr1055237
    Microarray_results: GPL8303_CB6_WBGene00035001_A
      GPL8303_CB6_WBGene00035001_B
      GPL14143_CBG14540_91-150_0.772_27_C
      GPL14143_CBG14540_435-494_0.755_36_B
      GPL14143_CBG14540_1035-1094_0.826_2_A
  Method: Gene