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WormBase Tree Display for Gene: WBGene00034833

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Name Class

WBGene00034833SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-fkh-2From_analysisInferred_from_orthology
Sequence_nameCBG14280
Molecular_nameCBG14280
CBG14280.1
CBP03597
Other_nameCBG_14280Accession_evidenceNDBHE600983
Public_nameCbr-fkh-2
DB_infoDatabaseNDBlocus_tagCBG_14280
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-fkh-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfkh
RNASeq_FPKMWBls:00000020.207867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.854233From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.909603From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.44523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.403993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.656798From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.741673From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000326.339From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
27.6973From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
29.0555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
21.5769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
25.6571From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000429.3928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
31.7558From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
34.1189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
32.6733From_analysisRNASeq.briggsae.WBls:0000004.control_mean
32.8306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
33.1639From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
33.8603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.104816From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.549842From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.54471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.530658From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.651507From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.956501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.619082From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.178707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.272541From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.312172From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.445637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.465821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.209905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.414856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.43642From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.436484From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.457984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.66319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.369355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.379048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.396952From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.415723From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630.068038From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.340189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.077064From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.122193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.445637From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.58107From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.451811From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.75036From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138315
00138316
00138317
Ortholog (27)
Paralog (11)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans fkh-2. In C. elegans, fkh-2 is involved in several processes, including nematode larval development; neuron differentiation; and non-motile cilium assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14280
Corresponding_CDS_historyCBG14280:bp194
Corresponding_transcriptCBG14280.1
Other_sequenceAcan_isotig13584
Dviv_isotig32092
HS00253
JI177266.1
Oden_isotig25520
HSC00658_1
JI165252.1
Experimental_infoExpr_patternExpr1068831
Microarray_resultsGPL8303_CB6_WBGene00034833_A
GPL8303_CB6_WBGene00034833_B
GPL14143_CBG14280_261-320_0.847_6_B
GPL14143_CBG14280_423-482_0.848_5_A
GPL14143_CBG14280_443-502_0.859_3_C
MethodGene