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WormBase Tree Display for Gene: WBGene00034831

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Name Class

WBGene00034831SMapS_parentSequencecb25.fpc3857a
IdentityVersion3
NameCGC_nameCbr-aex-4From_analysisInferred_from_orthology
Sequence_nameCBG14277
Molecular_nameCBG14277
CBG14277.1
CBP38244
Other_nameCbr-tag-81From_analysisInferred_from_orthology
CBG_14277Accession_evidenceNDBHE600983
Public_nameCbr-aex-4
DB_infoDatabaseNDBlocus_tagCBG_14277
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-tag-81
320 Oct 2008 11:49:02WBPerson2970Name_changeCGC_nameCbr-aex-4
Other_nameCbr-tag-81
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classaex
Allele (18)
RNASeq_FPKMWBls:00000025.05034From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.4543From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.57887From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.73369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.65628From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.25142From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.64277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.204337From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.408674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.136225From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.159121From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.318241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.353261From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.377682From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.379153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.691227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.264821From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.24615From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.47363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.86923From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.32343From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.55526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000358.06535From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.854481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
4.93483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.17044From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.02997From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.12512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.76734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000413.36544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.56697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.66469From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.73244From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.76241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.23492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.49866From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.75857From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.78056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.84113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006313.1138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.20955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.222From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.55845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.62076From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.32988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
4.77594From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.40561From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001014.30803From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.56697From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.22449From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.44842From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Contained_in_operonCBOPA0906
Ortholog (25)
ParalogWBGene00029102Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031132Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Target SNARE coiled-coil homology domain. Is an ortholog of C. elegans aex-4. In C. elegans, aex-4 is involved in positive regulation of defecation and positive regulation of protein secretion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14277
Corresponding_CDS_historyCBG14277:bp194
CBG14277:bp255
Corresponding_transcriptCBG14277.1
Other_sequenceOden_isotig21081
Experimental_infoExpr_patternExpr1066746
Microarray_resultsGPL8303_CB6_WBGene00034831_A
GPL8303_CB6_WBGene00034831_B
GPL14143_CBG14277_141-200_0.864_4_B
GPL14143_CBG14277_440-499_0.761_18_C
GPL14143_CBG14277_522-581_0.801_12_A
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene