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WormBase Tree Display for Gene: WBGene00034816

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Name Class

WBGene00034816SMapS_parentSequencecb25.fpc3857a
IdentityVersion1
NameSequence_nameCBG14255
Molecular_nameCBG14255
CBG14255.1
CBP44945
Other_nameCBG_14255Accession_evidenceNDBHE600983
Public_nameCBG14255
DB_infoDatabaseNDBlocus_tagCBG_14255
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.042005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.416605From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.584697From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.623112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.134173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.345997From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.359435From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.0504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.095226From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.140052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.127636From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.192456From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.901657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.02393From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.1462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.922973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.960345From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.985291From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.99528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.182892From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.30686From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.9396From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.32905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.88877From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.07237From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.47068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.708713From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.218569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.220402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.371705From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.523008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.629097From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.55441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.240632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.308589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.314088From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.317388From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.326187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.380945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.110945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.20592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.262203From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.27461From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630.065941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.083449From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.167918From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.31018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.380019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.097279From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.111108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.15845From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.380019From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.599533From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.353103From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.618167From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (24)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: LDL receptor-like superfamily; Low-density lipoprotein (LDL) receptor class A repeat; and Low-density lipoprotein receptor class A domain-containing protein 1. Is an ortholog of C. elegans R11G1.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14255
Corresponding_CDS_historyCBG14255:bp194
CBG14255:bp255
Corresponding_transcriptCBG14255.1
Other_sequenceDviv_isotig33442
SR03614
Experimental_infoExpr_patternExpr1062778
Microarray_resultsGPL8303_CB6_WBGene00034816_A
GPL8303_CB6_WBGene00034816_B
GPL14143_CBG14255_4496-4555_0.777_106_A
GPL14143_CBG14255_4930-4989_0.746_212_C
GPL14143_CBG14255_5092-5151_0.666_433_B
MethodGene