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WormBase Tree Display for Gene: WBGene00034718

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Name Class

WBGene00034718SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-aqp-7From_analysisInferred_from_orthology
Sequence_nameCBG14117
Molecular_nameCBG14117
CBG14117.1
CBP40058
Other_nameCBG_14117Accession_evidenceNDBHE600983
Public_nameCbr-aqp-7
DB_infoDatabaseNDBlocus_tagCBG_14117
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-aqp-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classaqp
AlleleWBVar00029084
RNASeq_FPKMWBls:0000002160.945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
172.884From_analysisRNASeq.briggsae.WBls:0000002.control_mean
176.6From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
181.107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
146.964From_analysisRNASeq.briggsae.WBls:0000002.control_mean
168.773From_analysisRNASeq.briggsae.WBls:0000002.control_median
69.2058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.150983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.17601From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.20104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.41474From_analysisRNASeq.briggsae.WBls:0000003.control_mean
2.8922From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000424.62From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
26.8906From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
29.1611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
29.7617From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
31.7282From_analysisRNASeq.briggsae.WBls:0000004.control_mean
35.1618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
39.9362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027161.637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
27.5628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
77.4336From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
88.8778From_analysisRNASeq.briggsae.WBls:0000027.control_mean
119.535From_analysisRNASeq.briggsae.WBls:0000027.control_median
147.731From_analysisRNASeq.briggsae.WBls:0000027.control_mean
324.289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035394.306From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038179.94From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
205.991From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
248.391From_analysisRNASeq.briggsae.WBls:0000038.control_median
290.79From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
294.36From_analysisRNASeq.briggsae.WBls:0000038.control_mean
500.718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:0000041117.581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
125.772From_analysisRNASeq.briggsae.WBls:0000041.control_median
133.964From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
134.836From_analysisRNASeq.briggsae.WBls:0000041.control_mean
205.675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
82.1255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
124.151From_analysisRNASeq.briggsae.WBls:0000041.control_median
126.995From_analysisRNASeq.briggsae.WBls:0000041.control_mean
130.721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
91.9022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063106.422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
108.266From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
110.171From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
110.582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
87.0882From_analysisRNASeq.briggsae.WBls:0000063.control_mean
105.609From_analysisRNASeq.briggsae.WBls:0000063.control_mean
109.218From_analysisRNASeq.briggsae.WBls:0000063.control_median
198.213From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101133.964From_analysisRNASeq.briggsae.total_over_all_stages.control_median
157.436From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
114.081From_analysisRNASeq.briggsae.total_over_all_stages.control_median
144.414From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138197
00138198
00138199
Contained_in_operonCBOPA0396
Ortholog (29)
ParalogWBGene00024232Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028320Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031159Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031219Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033933Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034989Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038598Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable channel activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans aqp-7. In C. elegans, aqp-7 is involved in glycerol transmembrane transport and water transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14117
Corresponding_CDS_historyCBG14117:bp194
CBG14117:bp255
Corresponding_transcriptCBG14117.1
Other_sequence (60)
Experimental_infoExpr_patternExpr1068196
Microarray_resultsGPL8303_CB6_WBGene00034718_A
GPL8303_CB6_WBGene00034718_B
GPL14143_CBG14117_29-88_0.812_3_B
GPL14143_CBG14117_115-174_0.787_10_C
GPL14143_CBG14117_274-333_0.468_99_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene