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WormBase Tree Display for Gene: WBGene00034702

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Name Class

WBGene00034702SMapS_parentSequencecb25.fpc3857a
IdentityVersion1
NameSequence_nameCBG14081
Molecular_nameCBG14081a
CBG14081a.1
CBP22959
CBG14081b
CBP39807
CBG14081c
CBP47234
CBG14081b.1
CBG14081c.1
Other_nameCBG_14081Accession_evidenceNDBHE600983
Public_nameCBG14081
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00138010
WBVar00138016
WBVar00138011
WBVar00138017
WBVar00138012
WBVar00138013
WBVar00138014
WBVar00138015
WBVar00138009
RNASeq_FPKMWBls:000000210.0448From_analysisRNASeq.briggsae.WBls:0000002.control_mean
10.8461From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.5316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.75683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
7.01608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
8.93109From_analysisRNASeq.briggsae.WBls:0000002.control_median
9.28765From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000034.06695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
4.54537From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.0238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
4.21317From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
4.43464From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000428.683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
29.1132From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
29.5434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
28.9509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
29.7979From_analysisRNASeq.briggsae.WBls:0000004.control_mean
29.9389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
31.8735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000271.95151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
20.0148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.88856From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.28496From_analysisRNASeq.briggsae.WBls:0000027.control_mean
11.9225From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.8618From_analysisRNASeq.briggsae.WBls:0000027.control_median
19.8351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003519.8619From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.7062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
13.0168From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.3274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
14.4836From_analysisRNASeq.briggsae.WBls:0000038.control_mean
27.0854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.8154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000414.56244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.76548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.96234From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.15919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.62807From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.02517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.59218From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.74638From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.65919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
9.30678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.30595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.47727From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.93186From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.9819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.16663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.64853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.33915From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.11891From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010111.2409From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.02517From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.3797From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.41291From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00138186
00138187
Ortholog (30)
ParalogWBGene00023641Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025085Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031161Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034987Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042056Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans F53B1.8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14081a
CBG14081b
CBG14081c
Corresponding_CDS_historyCBG14081:bp194
CBG14081:bp255
Corresponding_transcriptCBG14081a.1
CBG14081b.1
CBG14081c.1
Other_sequence (30)
Experimental_infoExpr_patternExpr1062702
Microarray_resultsGPL8303_CB6_WBGene00034702_A
GPL8303_CB6_WBGene00034702_B
GPL14143_CBG14081_1296-1355_0.626_113_C
GPL14143_CBG14081_1428-1487_0.768_31_B
GPL14143_CBG14081_2262-2321_0.734_45_A
MethodGene