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WormBase Tree Display for Gene: WBGene00034692

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Name Class

WBGene00034692SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-peb-1From_analysisInferred_from_orthology
Sequence_nameCBG14059
Molecular_nameCBG14059
CBG14059.1
CBP45836
Other_nameCBG_14059Accession_evidenceNDBHE600983
Public_nameCbr-peb-1
DB_infoDatabaseNDBlocus_tagCBG_14059
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-peb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpeb
AlleleWBVar00120926
WBVar00001949
WBVar00001939
WBVar00001944
RNASeq_FPKMWBls:000000214.4886From_analysisRNASeq.briggsae.WBls:0000002.control_mean
18.3774From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
18.7543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.33404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.2102From_analysisRNASeq.briggsae.WBls:0000002.control_mean
12.3557From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.3751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.48722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.01541From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.5436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
3.31402From_analysisRNASeq.briggsae.WBls:0000003.control_mean
3.91124From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000432.1189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
34.9874From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
37.8558From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
34.2741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
37.413From_analysisRNASeq.briggsae.WBls:0000004.control_mean
40.5349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
42.2812From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.4497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.30652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.46496From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.07373From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.61587From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.49699From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.76678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003572.3187From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.6635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
14.6493From_analysisRNASeq.briggsae.WBls:0000038.control_median
14.8026From_analysisRNASeq.briggsae.WBls:0000038.control_mean
16.635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
20.0996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
9.81225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.712217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.23726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.77122From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.2349From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.30518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.68493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.65052From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.81211From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.31904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
3.6445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.267595From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.377301From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.461837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.498839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.419569From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.450028From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.36219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010112.5639From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.33404From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.3111From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.85457From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (24)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: FLYWCH zinc finger domain and Zinc finger, FLYWCH-type. Is an ortholog of C. elegans peb-1. In C. elegans, peb-1 is involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14059
Corresponding_CDS_historyCBG14059:bp194
CBG14059:bp255
Corresponding_transcriptCBG14059.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1061019
Microarray_resultsGPL8303_CB6_WBGene00034692_A
GPL8303_CB6_WBGene00034692_B
GPL14143_CBG14059_697-756_0.810_19_C
GPL14143_CBG14059_772-831_0.821_5_B
GPL14143_CBG14059_1126-1185_0.736_78_A
ReferenceWBPaper00013471
MethodGene