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WormBase Tree Display for Gene: WBGene00034297

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Name Class

WBGene00034297SMapS_parentSequencecb25.fpc3052b
IdentityVersion2
NameCGC_nameCbr-hum-8From_analysisInferred_from_orthology
Sequence_nameCBG13543
Molecular_nameCBG13543
CBG13543.1
CBP46781
Other_nameCBG_13543Accession_evidenceNDBHE600980
Public_nameCbr-hum-8
DB_infoDatabaseNDBlocus_tagCBG_13543
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-hum-8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhum
RNASeq_FPKMWBls:000000211.7576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.87586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.34658From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.66001From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.3726From_analysisRNASeq.briggsae.WBls:0000002.control_median
7.39863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
8.34467From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.492184From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.984368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.594323From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.798602From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000042.24851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
2.36479From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.48107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
2.44132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.54507From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.75145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.80301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.733206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
18.324From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.43153From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.82958From_analysisRNASeq.briggsae.WBls:0000027.control_mean
14.9185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.60181From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.67502From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003512.4761From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.2152From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
14.3196From_analysisRNASeq.briggsae.WBls:0000038.control_mean
15.0303From_analysisRNASeq.briggsae.WBls:0000038.control_median
15.8455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.1008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
25.1168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000414.80268From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.28044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.29826From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.31608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.43027From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.32189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.59038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.2133From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.96831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.8896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.88636From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.0435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.71759From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.78112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
7.15784From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.1164From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.51521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001017.34658From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.70572From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.00591From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.22767From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00137800
00137801
00137802
Ortholog (34)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans hum-8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13543
Corresponding_CDS_historyCBG13543:bp194
CBG13543:bp255
Corresponding_transcriptCBG13543.1
Other_sequence (32)
Experimental_infoExpr_patternExpr1066172
Microarray_resultsGPL8303_CB6_WBGene00034297_A
GPL8303_CB6_WBGene00034297_B
GPL14143_CBG13543_3513-3572_0.930_3_C
GPL14143_CBG13543_3827-3886_0.936_1_A
GPL14143_CBG13543_3924-3983_0.925_5_B
MethodGene